Protein–RNA interactions for Protein: P53671

LIMK2, LIM domain kinase 2, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2P53671 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
LIMK2P53671 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LIMK2P53671 FAM197Y1-201ENST00000421178 764 ntBASIC19.1■□□□□ 0.65
LIMK2P53671 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
LIMK2P53671 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
LIMK2P53671 CDC42EP2-202ENST00000533419 1279 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
LIMK2P53671 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.1■□□□□ 0.65
LIMK2P53671 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.1■□□□□ 0.65
LIMK2P53671 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.1■□□□□ 0.65
LIMK2P53671 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.1■□□□□ 0.65
LIMK2P53671 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LIMK2P53671 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC19.1■□□□□ 0.65
LIMK2P53671 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.1■□□□□ 0.65
LIMK2P53671 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LIMK2P53671 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
LIMK2P53671 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.1■□□□□ 0.65
LIMK2P53671 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LIMK2P53671 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
LIMK2P53671 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LIMK2P53671 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
LIMK2P53671 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LIMK2P53671 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LIMK2P53671 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.09■□□□□ 0.65
LIMK2P53671 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
LIMK2P53671 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
LIMK2P53671 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LIMK2P53671 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LIMK2P53671 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.09■□□□□ 0.65
LIMK2P53671 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.09■□□□□ 0.65
LIMK2P53671 AC009113.1-201ENST00000570267 2443 ntBASIC19.09■□□□□ 0.65
LIMK2P53671 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
LIMK2P53671 FUT4-201ENST00000358752 6059 ntAPPRIS P1 BASIC19.09■□□□□ 0.65
LIMK2P53671 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LIMK2P53671 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LIMK2P53671 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.09■□□□□ 0.65
LIMK2P53671 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.09■□□□□ 0.65
LIMK2P53671 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.09■□□□□ 0.65
LIMK2P53671 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC19.09■□□□□ 0.65
LIMK2P53671 AL353708.3-201ENST00000610272 989 ntBASIC19.09■□□□□ 0.65
LIMK2P53671 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC19.09■□□□□ 0.65
LIMK2P53671 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LIMK2P53671 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
LIMK2P53671 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LIMK2P53671 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LIMK2P53671 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC19.09■□□□□ 0.65
LIMK2P53671 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC19.09■□□□□ 0.65
LIMK2P53671 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LIMK2P53671 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
LIMK2P53671 AC104581.1-202ENST00000635932 2618 ntBASIC19.08■□□□□ 0.65
LIMK2P53671 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LIMK2P53671 WIZP1-201ENST00000531444 2299 ntBASIC19.08■□□□□ 0.65
LIMK2P53671 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.65
LIMK2P53671 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.65
LIMK2P53671 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.65
LIMK2P53671 P2RX3-204ENST00000616487 1346 ntTSL 5 BASIC19.08■□□□□ 0.65
LIMK2P53671 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
LIMK2P53671 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LIMK2P53671 AP002982.1-201ENST00000492365 877 ntBASIC19.08■□□□□ 0.64
LIMK2P53671 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LIMK2P53671 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LIMK2P53671 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
LIMK2P53671 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.08■□□□□ 0.64
LIMK2P53671 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LIMK2P53671 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LIMK2P53671 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
LIMK2P53671 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC19.08■□□□□ 0.64
LIMK2P53671 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
LIMK2P53671 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LIMK2P53671 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LIMK2P53671 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.08■□□□□ 0.64
LIMK2P53671 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC19.08■□□□□ 0.64
LIMK2P53671 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.08■□□□□ 0.64
LIMK2P53671 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC19.08■□□□□ 0.64
LIMK2P53671 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC19.08■□□□□ 0.64
LIMK2P53671 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC19.08■□□□□ 0.64
LIMK2P53671 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.08■□□□□ 0.64
LIMK2P53671 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LIMK2P53671 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LIMK2P53671 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
LIMK2P53671 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LIMK2P53671 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LIMK2P53671 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LIMK2P53671 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LIMK2P53671 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
LIMK2P53671 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.07■□□□□ 0.64
LIMK2P53671 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LIMK2P53671 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC19.07■□□□□ 0.64
LIMK2P53671 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LIMK2P53671 AC097493.4-201ENST00000641197 219 ntBASIC19.07■□□□□ 0.64
LIMK2P53671 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
LIMK2P53671 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
LIMK2P53671 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
LIMK2P53671 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.06■□□□□ 0.64
LIMK2P53671 MRPS2-201ENST00000241600 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
LIMK2P53671 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC19.06■□□□□ 0.64
LIMK2P53671 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.06■□□□□ 0.64
LIMK2P53671 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC19.06■□□□□ 0.64
LIMK2P53671 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.06■□□□□ 0.64
LIMK2P53671 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC19.06■□□□□ 0.64
LIMK2P53671 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.06■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 34.7 ms