Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC18.38■□□□□ 0.53
PDX1P52945 AC116407.4-201ENST00000623319 1061 ntBASIC18.38■□□□□ 0.53
PDX1P52945 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDX1P52945 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC18.38■□□□□ 0.53
PDX1P52945 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
PDX1P52945 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.38■□□□□ 0.53
PDX1P52945 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC18.38■□□□□ 0.53
PDX1P52945 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDX1P52945 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC18.38■□□□□ 0.53
PDX1P52945 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDX1P52945 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDX1P52945 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDX1P52945 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC18.38■□□□□ 0.53
PDX1P52945 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.38■□□□□ 0.53
PDX1P52945 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
PDX1P52945 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC18.38■□□□□ 0.53
PDX1P52945 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC18.37■□□□□ 0.53
PDX1P52945 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC18.37■□□□□ 0.53
PDX1P52945 TREX1-205ENST00000625293 1783 ntBASIC18.37■□□□□ 0.53
PDX1P52945 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDX1P52945 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC18.37■□□□□ 0.53
PDX1P52945 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDX1P52945 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDX1P52945 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PDX1P52945 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDX1P52945 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDX1P52945 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.37■□□□□ 0.53
PDX1P52945 CD81-212ENST00000526072 1172 ntTSL 5 BASIC18.37■□□□□ 0.53
PDX1P52945 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.37■□□□□ 0.53
PDX1P52945 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.37■□□□□ 0.53
PDX1P52945 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.37■□□□□ 0.53
PDX1P52945 AC083849.1-201ENST00000615227 514 ntBASIC18.37■□□□□ 0.53
PDX1P52945 AC093458.2-201ENST00000623150 629 ntBASIC18.37■□□□□ 0.53
PDX1P52945 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.37■□□□□ 0.53
PDX1P52945 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDX1P52945 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC18.37■□□□□ 0.53
PDX1P52945 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDX1P52945 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDX1P52945 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC18.37■□□□□ 0.53
PDX1P52945 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDX1P52945 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PDX1P52945 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
PDX1P52945 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC18.37■□□□□ 0.53
PDX1P52945 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC18.37■□□□□ 0.53
PDX1P52945 PWWP2AP1-201ENST00000429776 2273 ntBASIC18.37■□□□□ 0.53
PDX1P52945 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
PDX1P52945 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
PDX1P52945 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PDX1P52945 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDX1P52945 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDX1P52945 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PDX1P52945 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
PDX1P52945 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDX1P52945 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PDX1P52945 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
PDX1P52945 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PDX1P52945 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.36■□□□□ 0.53
PDX1P52945 KRT18P48-201ENST00000434763 852 ntBASIC18.36■□□□□ 0.53
PDX1P52945 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC18.36■□□□□ 0.53
PDX1P52945 PTK2-216ENST00000519881 863 ntTSL 3 BASIC18.36■□□□□ 0.53
PDX1P52945 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDX1P52945 AC007952.6-201ENST00000573168 2673 ntBASIC18.36■□□□□ 0.53
PDX1P52945 MIR4674-201ENST00000582457 87 ntBASIC18.36■□□□□ 0.53
PDX1P52945 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC18.36■□□□□ 0.53
PDX1P52945 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDX1P52945 AC003957.1-201ENST00000625108 2673 ntBASIC18.36■□□□□ 0.53
PDX1P52945 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PDX1P52945 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
PDX1P52945 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
PDX1P52945 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.35■□□□□ 0.53
PDX1P52945 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PDX1P52945 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDX1P52945 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC18.35■□□□□ 0.53
PDX1P52945 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDX1P52945 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PDX1P52945 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PDX1P52945 PDLIM7-205ENST00000393551 1226 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PDX1P52945 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PDX1P52945 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
PDX1P52945 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.35■□□□□ 0.53
PDX1P52945 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC18.35■□□□□ 0.53
PDX1P52945 HYMAI.1-201ENST00000620949 238 ntBASIC18.35■□□□□ 0.53
PDX1P52945 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDX1P52945 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
PDX1P52945 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDX1P52945 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PDX1P52945 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.35■□□□□ 0.53
PDX1P52945 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.35■□□□□ 0.53
PDX1P52945 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDX1P52945 SORCS3-201ENST00000369699 5530 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PDX1P52945 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC18.35■□□□□ 0.53
PDX1P52945 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDX1P52945 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDX1P52945 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDX1P52945 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDX1P52945 AC116562.4-201ENST00000641316 2276 ntBASIC18.34■□□□□ 0.53
PDX1P52945 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDX1P52945 POLI-202ENST00000406285 2030 ntTSL 2 BASIC18.34■□□□□ 0.53
PDX1P52945 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDX1P52945 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms