Protein–RNA interactions for Protein: P51801

CLCNKB, Chloride channel protein ClC-Kb, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKBP51801 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
CLCNKBP51801 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLCNKBP51801 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLCNKBP51801 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLCNKBP51801 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.23■□□□□ 0.83
CLCNKBP51801 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLCNKBP51801 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.23■□□□□ 0.83
CLCNKBP51801 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLCNKBP51801 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
CLCNKBP51801 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
CLCNKBP51801 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLCNKBP51801 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.22■□□□□ 0.83
CLCNKBP51801 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLCNKBP51801 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.22■□□□□ 0.83
CLCNKBP51801 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLCNKBP51801 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLCNKBP51801 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.22■□□□□ 0.83
CLCNKBP51801 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CLCNKBP51801 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLCNKBP51801 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.22■□□□□ 0.83
CLCNKBP51801 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLCNKBP51801 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLCNKBP51801 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC20.22■□□□□ 0.83
CLCNKBP51801 AC112907.2-201ENST00000448639 330 ntBASIC20.22■□□□□ 0.83
CLCNKBP51801 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLCNKBP51801 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.22■□□□□ 0.83
CLCNKBP51801 CD320-202ENST00000537716 1119 ntTSL 2 BASIC20.22■□□□□ 0.83
CLCNKBP51801 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC20.22■□□□□ 0.83
CLCNKBP51801 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.22■□□□□ 0.83
CLCNKBP51801 AL512353.2-201ENST00000448759 1962 ntBASIC20.22■□□□□ 0.83
CLCNKBP51801 AL032819.2-201ENST00000624543 2162 ntBASIC20.22■□□□□ 0.83
CLCNKBP51801 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
CLCNKBP51801 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CLCNKBP51801 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC20.22■□□□□ 0.83
CLCNKBP51801 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLCNKBP51801 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CLCNKBP51801 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.22■□□□□ 0.83
CLCNKBP51801 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.22■□□□□ 0.83
CLCNKBP51801 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLCNKBP51801 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.21■□□□□ 0.83
CLCNKBP51801 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLCNKBP51801 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.21■□□□□ 0.83
CLCNKBP51801 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLCNKBP51801 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLCNKBP51801 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLCNKBP51801 STARP1-201ENST00000397973 869 ntBASIC20.21■□□□□ 0.83
CLCNKBP51801 SPDYE15P-201ENST00000424157 909 ntBASIC20.21■□□□□ 0.83
CLCNKBP51801 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CLCNKBP51801 FAM86EP-206ENST00000510506 987 ntBASIC20.21■□□□□ 0.83
CLCNKBP51801 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
CLCNKBP51801 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLCNKBP51801 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.21■□□□□ 0.83
CLCNKBP51801 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.21■□□□□ 0.83
CLCNKBP51801 DFFB-212ENST00000625756 649 ntTSL 5 BASIC20.21■□□□□ 0.83
CLCNKBP51801 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CLCNKBP51801 KATNBL1P6-202ENST00000562413 1466 ntBASIC20.21■□□□□ 0.83
CLCNKBP51801 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLCNKBP51801 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLCNKBP51801 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CLCNKBP51801 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.21■□□□□ 0.83
CLCNKBP51801 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CLCNKBP51801 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.21■□□□□ 0.83
CLCNKBP51801 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
CLCNKBP51801 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CLCNKBP51801 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC20.21■□□□□ 0.83
CLCNKBP51801 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.21■□□□□ 0.83
CLCNKBP51801 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC20.21■□□□□ 0.83
CLCNKBP51801 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.83
CLCNKBP51801 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCNKBP51801 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC20.2■□□□□ 0.82
CLCNKBP51801 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCNKBP51801 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCNKBP51801 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CLCNKBP51801 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCNKBP51801 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCNKBP51801 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCNKBP51801 AC024243.1-201ENST00000609234 778 ntBASIC20.2■□□□□ 0.82
CLCNKBP51801 AC091076.1-201ENST00000610741 619 ntBASIC20.2■□□□□ 0.82
CLCNKBP51801 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC20.2■□□□□ 0.82
CLCNKBP51801 AL121956.5-201ENST00000625261 221 ntBASIC20.2■□□□□ 0.82
CLCNKBP51801 RCC2P3-201ENST00000418112 1537 ntBASIC20.2■□□□□ 0.82
CLCNKBP51801 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCNKBP51801 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
CLCNKBP51801 YPEL3-202ENST00000398841 1588 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CLCNKBP51801 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.2■□□□□ 0.82
CLCNKBP51801 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC20.2■□□□□ 0.82
CLCNKBP51801 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC20.19■□□□□ 0.82
CLCNKBP51801 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.19■□□□□ 0.82
CLCNKBP51801 FP475955.4-201ENST00000623131 1990 ntBASIC20.19■□□□□ 0.82
CLCNKBP51801 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.19■□□□□ 0.82
CLCNKBP51801 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLCNKBP51801 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
CLCNKBP51801 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLCNKBP51801 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLCNKBP51801 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.19■□□□□ 0.82
CLCNKBP51801 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC20.19■□□□□ 0.82
CLCNKBP51801 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.19■□□□□ 0.82
CLCNKBP51801 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CLCNKBP51801 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CLCNKBP51801 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms