Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HCFC1P51610 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC16.5■□□□□ 0.23
HCFC1P51610 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC16.5■□□□□ 0.23
HCFC1P51610 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HCFC1P51610 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
HCFC1P51610 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HCFC1P51610 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
HCFC1P51610 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HCFC1P51610 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HCFC1P51610 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
HCFC1P51610 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
HCFC1P51610 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HCFC1P51610 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.5■□□□□ 0.23
HCFC1P51610 SPEG-225ENST00000617028 815 ntTSL 5 BASIC16.5■□□□□ 0.23
HCFC1P51610 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.5■□□□□ 0.23
HCFC1P51610 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
HCFC1P51610 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.49■□□□□ 0.23
HCFC1P51610 PATZ1-201ENST00000215919 2516 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HCFC1P51610 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HCFC1P51610 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HCFC1P51610 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
HCFC1P51610 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HCFC1P51610 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HCFC1P51610 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HCFC1P51610 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HCFC1P51610 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
HCFC1P51610 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
HCFC1P51610 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.49■□□□□ 0.23
HCFC1P51610 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.49■□□□□ 0.23
HCFC1P51610 PCBP3-203ENST00000400308 1911 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
HCFC1P51610 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC16.49■□□□□ 0.23
HCFC1P51610 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HCFC1P51610 GAS2L1P1-201ENST00000420145 1480 ntBASIC16.49■□□□□ 0.23
HCFC1P51610 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
HCFC1P51610 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HCFC1P51610 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HCFC1P51610 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC16.48■□□□□ 0.23
HCFC1P51610 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.48■□□□□ 0.23
HCFC1P51610 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
HCFC1P51610 AL031008.1-201ENST00000619963 541 ntBASIC16.48■□□□□ 0.23
HCFC1P51610 BID-204ENST00000399767 2129 ntTSL 2 BASIC16.48■□□□□ 0.23
HCFC1P51610 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HCFC1P51610 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC16.48■□□□□ 0.23
HCFC1P51610 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HCFC1P51610 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC16.48■□□□□ 0.23
HCFC1P51610 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HCFC1P51610 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
HCFC1P51610 AC080075.1-201ENST00000469747 427 ntTSL 2 BASIC16.48■□□□□ 0.23
HCFC1P51610 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC16.48■□□□□ 0.23
HCFC1P51610 AC092119.3-201ENST00000612618 583 ntBASIC16.48■□□□□ 0.23
HCFC1P51610 AL157888.1-201ENST00000631930 593 ntBASIC16.48■□□□□ 0.23
HCFC1P51610 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC16.48■□□□□ 0.23
HCFC1P51610 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC16.48■□□□□ 0.23
HCFC1P51610 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
HCFC1P51610 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
HCFC1P51610 AL391807.1-203ENST00000604392 2365 ntBASIC16.47■□□□□ 0.23
HCFC1P51610 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HCFC1P51610 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC16.47■□□□□ 0.23
HCFC1P51610 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HCFC1P51610 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HCFC1P51610 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
HCFC1P51610 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
HCFC1P51610 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
HCFC1P51610 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HCFC1P51610 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC16.47■□□□□ 0.23
HCFC1P51610 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC16.47■□□□□ 0.23
HCFC1P51610 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HCFC1P51610 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC16.47■□□□□ 0.23
HCFC1P51610 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.47■□□□□ 0.23
HCFC1P51610 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HCFC1P51610 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HCFC1P51610 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HCFC1P51610 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC16.47■□□□□ 0.23
HCFC1P51610 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
HCFC1P51610 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
HCFC1P51610 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC16.47■□□□□ 0.23
HCFC1P51610 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
HCFC1P51610 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
HCFC1P51610 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC16.47■□□□□ 0.23
HCFC1P51610 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HCFC1P51610 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC16.46■□□□□ 0.23
HCFC1P51610 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HCFC1P51610 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC16.46■□□□□ 0.23
HCFC1P51610 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.46■□□□□ 0.23
HCFC1P51610 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HCFC1P51610 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
HCFC1P51610 AL162741.1-201ENST00000565563 1558 ntBASIC16.46■□□□□ 0.23
HCFC1P51610 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC16.46■□□□□ 0.23
HCFC1P51610 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HCFC1P51610 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HCFC1P51610 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
HCFC1P51610 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC16.46■□□□□ 0.23
HCFC1P51610 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
HCFC1P51610 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC16.46■□□□□ 0.23
HCFC1P51610 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
HCFC1P51610 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
HCFC1P51610 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HCFC1P51610 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.46■□□□□ 0.23
HCFC1P51610 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
HCFC1P51610 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms