Protein–RNA interactions for Protein: P49593

PPM1F, Protein phosphatase 1F, humanhuman

Predicted RBP Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1FP49593 ZNF280D-205ENST00000559000 4726 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
PPM1FP49593 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PPM1FP49593 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PPM1FP49593 ESR2-204ENST00000353772 2454 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PPM1FP49593 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
PPM1FP49593 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PPM1FP49593 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PPM1FP49593 ZNF331-202ENST00000411977 2248 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PPM1FP49593 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC18.61■□□□□ 0.57
PPM1FP49593 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PPM1FP49593 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.61■□□□□ 0.57
PPM1FP49593 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PPM1FP49593 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PPM1FP49593 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC18.61■□□□□ 0.57
PPM1FP49593 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PPM1FP49593 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PPM1FP49593 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC18.61■□□□□ 0.57
PPM1FP49593 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PPM1FP49593 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC18.61■□□□□ 0.57
PPM1FP49593 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC18.61■□□□□ 0.57
PPM1FP49593 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.61■□□□□ 0.57
PPM1FP49593 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC18.61■□□□□ 0.57
PPM1FP49593 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.61■□□□□ 0.57
PPM1FP49593 KRT18P35-201ENST00000510488 1269 ntBASIC18.61■□□□□ 0.57
PPM1FP49593 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.61■□□□□ 0.57
PPM1FP49593 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC18.61■□□□□ 0.57
PPM1FP49593 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PPM1FP49593 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PPM1FP49593 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PPM1FP49593 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.61■□□□□ 0.57
PPM1FP49593 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC18.61■□□□□ 0.57
PPM1FP49593 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC18.61■□□□□ 0.57
PPM1FP49593 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.6■□□□□ 0.57
PPM1FP49593 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.6■□□□□ 0.57
PPM1FP49593 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC18.6■□□□□ 0.57
PPM1FP49593 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
PPM1FP49593 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PPM1FP49593 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PPM1FP49593 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PPM1FP49593 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PPM1FP49593 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC18.6■□□□□ 0.57
PPM1FP49593 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PPM1FP49593 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PPM1FP49593 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PPM1FP49593 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC18.6■□□□□ 0.57
PPM1FP49593 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PPM1FP49593 AC103564.1-201ENST00000437330 562 ntTSL 5 BASIC18.6■□□□□ 0.57
PPM1FP49593 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC18.6■□□□□ 0.57
PPM1FP49593 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.6■□□□□ 0.57
PPM1FP49593 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PPM1FP49593 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC18.6■□□□□ 0.57
PPM1FP49593 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PPM1FP49593 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PPM1FP49593 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PPM1FP49593 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PPM1FP49593 TCF3P1-201ENST00000423021 1937 ntBASIC18.6■□□□□ 0.57
PPM1FP49593 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.6■□□□□ 0.57
PPM1FP49593 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PPM1FP49593 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PPM1FP49593 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC18.59■□□□□ 0.57
PPM1FP49593 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PPM1FP49593 LBX2-AS1-202ENST00000603175 2083 ntBASIC18.59■□□□□ 0.57
PPM1FP49593 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC18.59■□□□□ 0.57
PPM1FP49593 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.59■□□□□ 0.57
PPM1FP49593 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PPM1FP49593 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PPM1FP49593 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PPM1FP49593 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PPM1FP49593 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PPM1FP49593 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC18.59■□□□□ 0.57
PPM1FP49593 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC18.59■□□□□ 0.57
PPM1FP49593 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PPM1FP49593 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PPM1FP49593 INGX-201ENST00000359239 846 ntBASIC18.59■□□□□ 0.57
PPM1FP49593 HMGA1P5-201ENST00000412453 271 ntBASIC18.59■□□□□ 0.57
PPM1FP49593 ATP6V0C-203ENST00000565223 668 ntTSL 3 BASIC18.59■□□□□ 0.57
PPM1FP49593 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.59■□□□□ 0.57
PPM1FP49593 ATP6V0C-204ENST00000568562 477 ntTSL 3 BASIC18.59■□□□□ 0.57
PPM1FP49593 AC087388.1-201ENST00000571370 1112 ntBASIC18.59■□□□□ 0.57
PPM1FP49593 NT5C-211ENST00000582170 653 ntTSL 3 BASIC18.59■□□□□ 0.57
PPM1FP49593 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC18.59■□□□□ 0.57
PPM1FP49593 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
PPM1FP49593 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PPM1FP49593 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PPM1FP49593 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC18.59■□□□□ 0.57
PPM1FP49593 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PPM1FP49593 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC18.59■□□□□ 0.57
PPM1FP49593 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC18.59■□□□□ 0.57
PPM1FP49593 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PPM1FP49593 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC18.59■□□□□ 0.57
PPM1FP49593 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PPM1FP49593 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PPM1FP49593 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC18.58■□□□□ 0.57
PPM1FP49593 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.58■□□□□ 0.57
PPM1FP49593 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
PPM1FP49593 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PPM1FP49593 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
PPM1FP49593 MAP7D2-203ENST00000443379 2476 ntAPPRIS ALT2 TSL 2 BASIC18.58■□□□□ 0.57
PPM1FP49593 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC18.58■□□□□ 0.57
PPM1FP49593 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms