Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 AC124283.5-201ENST00000624661 1809 ntBASIC16.79■□□□□ 0.28
SRP9P49458 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC16.79■□□□□ 0.28
SRP9P49458 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SRP9P49458 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SRP9P49458 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.79■□□□□ 0.28
SRP9P49458 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SRP9P49458 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SRP9P49458 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SRP9P49458 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRP9P49458 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRP9P49458 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SRP9P49458 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SRP9P49458 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC16.78■□□□□ 0.28
SRP9P49458 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRP9P49458 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
SRP9P49458 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRP9P49458 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC16.78■□□□□ 0.28
SRP9P49458 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SRP9P49458 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SRP9P49458 POMC-201ENST00000264708 1074 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SRP9P49458 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRP9P49458 AC128676.1-201ENST00000454392 318 ntBASIC16.78■□□□□ 0.28
SRP9P49458 PNN-205ENST00000556530 601 ntTSL 2 BASIC16.78■□□□□ 0.28
SRP9P49458 DEDD2-205ENST00000596251 1183 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRP9P49458 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC16.78■□□□□ 0.28
SRP9P49458 AC073648.6-201ENST00000641589 218 ntBASIC16.78■□□□□ 0.28
SRP9P49458 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC16.78■□□□□ 0.28
SRP9P49458 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRP9P49458 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SRP9P49458 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SRP9P49458 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.78■□□□□ 0.28
SRP9P49458 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SRP9P49458 AC018553.1-201ENST00000616682 1458 ntBASIC16.78■□□□□ 0.28
SRP9P49458 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SRP9P49458 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SRP9P49458 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SRP9P49458 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.78■□□□□ 0.28
SRP9P49458 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SRP9P49458 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SRP9P49458 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SRP9P49458 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SRP9P49458 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SRP9P49458 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
SRP9P49458 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SRP9P49458 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SRP9P49458 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SRP9P49458 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SRP9P49458 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SRP9P49458 TREX2-204ENST00000370212 861 ntTSL 5 BASIC16.77■□□□□ 0.28
SRP9P49458 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
SRP9P49458 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SRP9P49458 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.77■□□□□ 0.28
SRP9P49458 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC16.77■□□□□ 0.28
SRP9P49458 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.77■□□□□ 0.28
SRP9P49458 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SRP9P49458 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC16.77■□□□□ 0.28
SRP9P49458 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC16.77■□□□□ 0.28
SRP9P49458 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
SRP9P49458 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SRP9P49458 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
SRP9P49458 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SRP9P49458 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SRP9P49458 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
SRP9P49458 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.77■□□□□ 0.27
SRP9P49458 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.27
SRP9P49458 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.77■□□□□ 0.27
SRP9P49458 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.77■□□□□ 0.27
SRP9P49458 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SRP9P49458 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SRP9P49458 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SRP9P49458 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
SRP9P49458 AC067852.2-201ENST00000590513 2313 ntBASIC16.76■□□□□ 0.27
SRP9P49458 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SRP9P49458 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SRP9P49458 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SRP9P49458 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
SRP9P49458 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SRP9P49458 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SRP9P49458 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SRP9P49458 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC16.76■□□□□ 0.27
SRP9P49458 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SRP9P49458 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SRP9P49458 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SRP9P49458 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SRP9P49458 PARL-201ENST00000311101 1240 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SRP9P49458 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC16.76■□□□□ 0.27
SRP9P49458 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SRP9P49458 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC16.76■□□□□ 0.27
SRP9P49458 HOXB-AS3-204ENST00000466037 522 ntTSL 3 BASIC16.76■□□□□ 0.27
SRP9P49458 LINC00654-202ENST00000589201 579 ntTSL 3 BASIC16.76■□□□□ 0.27
SRP9P49458 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SRP9P49458 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SRP9P49458 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SRP9P49458 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SRP9P49458 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC16.76■□□□□ 0.27
SRP9P49458 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC16.76■□□□□ 0.27
SRP9P49458 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
SRP9P49458 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SRP9P49458 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC16.76■□□□□ 0.27
SRP9P49458 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms