Protein–RNA interactions for Protein: P48382

RFX5, DNA-binding protein RFX5, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX5P48382 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
RFX5P48382 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RFX5P48382 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
RFX5P48382 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC23.27■■□□□ 1.32
RFX5P48382 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RFX5P48382 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RFX5P48382 UBL5-201ENST00000358666 513 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RFX5P48382 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC23.27■■□□□ 1.32
RFX5P48382 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC23.27■■□□□ 1.32
RFX5P48382 AL031432.5-201ENST00000641059 760 ntBASIC23.27■■□□□ 1.32
RFX5P48382 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC23.27■■□□□ 1.32
RFX5P48382 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RFX5P48382 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RFX5P48382 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RFX5P48382 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC23.27■■□□□ 1.32
RFX5P48382 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RFX5P48382 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RFX5P48382 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
RFX5P48382 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
RFX5P48382 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC23.27■■□□□ 1.32
RFX5P48382 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC23.27■■□□□ 1.32
RFX5P48382 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RFX5P48382 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
RFX5P48382 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC23.26■■□□□ 1.31
RFX5P48382 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
RFX5P48382 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC23.26■■□□□ 1.31
RFX5P48382 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC23.26■■□□□ 1.31
RFX5P48382 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RFX5P48382 CD81-212ENST00000526072 1172 ntTSL 5 BASIC23.26■■□□□ 1.31
RFX5P48382 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RFX5P48382 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC23.26■■□□□ 1.31
RFX5P48382 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RFX5P48382 NUDT16-201ENST00000502852 1552 ntTSL 2 BASIC23.26■■□□□ 1.31
RFX5P48382 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
RFX5P48382 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC23.26■■□□□ 1.31
RFX5P48382 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RFX5P48382 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC23.25■■□□□ 1.31
RFX5P48382 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC23.25■■□□□ 1.31
RFX5P48382 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
RFX5P48382 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC23.25■■□□□ 1.31
RFX5P48382 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RFX5P48382 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RFX5P48382 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC23.25■■□□□ 1.31
RFX5P48382 AP000523.1-201ENST00000398242 1049 ntBASIC23.25■■□□□ 1.31
RFX5P48382 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC23.25■■□□□ 1.31
RFX5P48382 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC23.25■■□□□ 1.31
RFX5P48382 DFFB-212ENST00000625756 649 ntTSL 5 BASIC23.25■■□□□ 1.31
RFX5P48382 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC23.25■■□□□ 1.31
RFX5P48382 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC23.25■■□□□ 1.31
RFX5P48382 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RFX5P48382 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC23.25■■□□□ 1.31
RFX5P48382 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RFX5P48382 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC23.25■■□□□ 1.31
RFX5P48382 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
RFX5P48382 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC23.25■■□□□ 1.31
RFX5P48382 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC23.25■■□□□ 1.31
RFX5P48382 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC23.25■■□□□ 1.31
RFX5P48382 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
RFX5P48382 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RFX5P48382 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
RFX5P48382 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RFX5P48382 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RFX5P48382 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC23.24■■□□□ 1.31
RFX5P48382 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC23.24■■□□□ 1.31
RFX5P48382 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RFX5P48382 MIR564-202ENST00000385049 94 ntBASIC23.24■■□□□ 1.31
RFX5P48382 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC23.24■■□□□ 1.31
RFX5P48382 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC23.24■■□□□ 1.31
RFX5P48382 SAPCD2P2-201ENST00000431719 1174 ntBASIC23.24■■□□□ 1.31
RFX5P48382 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC23.24■■□□□ 1.31
RFX5P48382 AC140113.3-201ENST00000605663 199 ntBASIC23.24■■□□□ 1.31
RFX5P48382 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RFX5P48382 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RFX5P48382 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RFX5P48382 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RFX5P48382 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RFX5P48382 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RFX5P48382 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RFX5P48382 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC23.24■■□□□ 1.31
RFX5P48382 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
RFX5P48382 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC23.24■■□□□ 1.31
RFX5P48382 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RFX5P48382 CTNNBL1-201ENST00000361383 1925 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
RFX5P48382 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC23.23■■□□□ 1.31
RFX5P48382 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
RFX5P48382 MTMR9LP-203ENST00000426597 1545 ntBASIC23.23■■□□□ 1.31
RFX5P48382 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC23.23■■□□□ 1.31
RFX5P48382 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC23.23■■□□□ 1.31
RFX5P48382 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
RFX5P48382 AL031133.1-201ENST00000406807 723 ntBASIC23.23■■□□□ 1.31
RFX5P48382 SPDYE15P-201ENST00000424157 909 ntBASIC23.23■■□□□ 1.31
RFX5P48382 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
RFX5P48382 SEC1P-202ENST00000473944 940 ntBASIC23.23■■□□□ 1.31
RFX5P48382 SNX5-210ENST00000481323 562 ntTSL 3 BASIC23.23■■□□□ 1.31
RFX5P48382 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
RFX5P48382 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC23.23■■□□□ 1.31
RFX5P48382 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC23.23■■□□□ 1.31
RFX5P48382 HYMAI.1-201ENST00000620949 238 ntBASIC23.23■■□□□ 1.31
RFX5P48382 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC23.23■■□□□ 1.31
RFX5P48382 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC23.23■■□□□ 1.31
Retrieved 100 of 98,524 protein–RNA pairs in 26.9 ms