Protein–RNA interactions for Protein: P48065

SLC6A12, Sodium- and chloride-dependent betaine transporter, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A12P48065 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
SLC6A12P48065 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
SLC6A12P48065 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC18.27■□□□□ 0.52
SLC6A12P48065 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
SLC6A12P48065 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC18.27■□□□□ 0.52
SLC6A12P48065 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.52
SLC6A12P48065 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC6A12P48065 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.27■□□□□ 0.52
SLC6A12P48065 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC18.27■□□□□ 0.52
SLC6A12P48065 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.27■□□□□ 0.52
SLC6A12P48065 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC6A12P48065 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.27■□□□□ 0.52
SLC6A12P48065 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC6A12P48065 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC6A12P48065 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC18.27■□□□□ 0.52
SLC6A12P48065 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC6A12P48065 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
SLC6A12P48065 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
SLC6A12P48065 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC18.27■□□□□ 0.52
SLC6A12P48065 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC18.27■□□□□ 0.52
SLC6A12P48065 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC18.27■□□□□ 0.52
SLC6A12P48065 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC18.27■□□□□ 0.52
SLC6A12P48065 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.27■□□□□ 0.52
SLC6A12P48065 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC18.27■□□□□ 0.52
SLC6A12P48065 DECR2-212ENST00000627716 352 ntTSL 2 BASIC18.27■□□□□ 0.52
SLC6A12P48065 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
SLC6A12P48065 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.51
SLC6A12P48065 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SLC6A12P48065 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.27■□□□□ 0.51
SLC6A12P48065 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SLC6A12P48065 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SLC6A12P48065 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SLC6A12P48065 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
SLC6A12P48065 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC6A12P48065 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.26■□□□□ 0.51
SLC6A12P48065 WIZP1-201ENST00000531444 2299 ntBASIC18.26■□□□□ 0.51
SLC6A12P48065 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC6A12P48065 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC6A12P48065 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC6A12P48065 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC6A12P48065 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC6A12P48065 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC6A12P48065 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC18.26■□□□□ 0.51
SLC6A12P48065 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.26■□□□□ 0.51
SLC6A12P48065 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SLC6A12P48065 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC6A12P48065 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC18.26■□□□□ 0.51
SLC6A12P48065 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC6A12P48065 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC18.26■□□□□ 0.51
SLC6A12P48065 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
SLC6A12P48065 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
SLC6A12P48065 MIR718-201ENST00000390190 70 ntBASIC18.26■□□□□ 0.51
SLC6A12P48065 MFAP1P1-201ENST00000442257 1255 ntBASIC18.26■□□□□ 0.51
SLC6A12P48065 AL355355.2-201ENST00000442321 338 ntBASIC18.26■□□□□ 0.51
SLC6A12P48065 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC18.26■□□□□ 0.51
SLC6A12P48065 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC18.26■□□□□ 0.51
SLC6A12P48065 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.26■□□□□ 0.51
SLC6A12P48065 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SLC6A12P48065 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC18.26■□□□□ 0.51
SLC6A12P48065 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC18.26■□□□□ 0.51
SLC6A12P48065 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.26■□□□□ 0.51
SLC6A12P48065 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SLC6A12P48065 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC18.26■□□□□ 0.51
SLC6A12P48065 AC120498.9-201ENST00000339021 3867 ntBASIC18.26■□□□□ 0.51
SLC6A12P48065 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
SLC6A12P48065 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.26■□□□□ 0.51
SLC6A12P48065 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
SLC6A12P48065 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
SLC6A12P48065 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
SLC6A12P48065 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC18.26■□□□□ 0.51
SLC6A12P48065 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC6A12P48065 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC6A12P48065 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC6A12P48065 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.25■□□□□ 0.51
SLC6A12P48065 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SLC6A12P48065 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC18.25■□□□□ 0.51
SLC6A12P48065 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SLC6A12P48065 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC6A12P48065 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC6A12P48065 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC6A12P48065 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC18.25■□□□□ 0.51
SLC6A12P48065 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC18.25■□□□□ 0.51
SLC6A12P48065 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SLC6A12P48065 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC18.25■□□□□ 0.51
SLC6A12P48065 AC097488.1-201ENST00000507834 756 ntBASIC18.25■□□□□ 0.51
SLC6A12P48065 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC18.25■□□□□ 0.51
SLC6A12P48065 AP003071.4-201ENST00000562276 1284 ntBASIC18.25■□□□□ 0.51
SLC6A12P48065 SLC25A1P4-201ENST00000567977 778 ntBASIC18.25■□□□□ 0.51
SLC6A12P48065 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC6A12P48065 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC6A12P48065 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC18.25■□□□□ 0.51
SLC6A12P48065 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC6A12P48065 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.25■□□□□ 0.51
SLC6A12P48065 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC6A12P48065 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
SLC6A12P48065 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC18.25■□□□□ 0.51
SLC6A12P48065 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.25■□□□□ 0.51
SLC6A12P48065 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC18.25■□□□□ 0.51
SLC6A12P48065 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
SLC6A12P48065 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms