Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.98■□□□□ 0.47
RORAP35398 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC17.98■□□□□ 0.47
RORAP35398 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC17.98■□□□□ 0.47
RORAP35398 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.98■□□□□ 0.47
RORAP35398 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RORAP35398 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
RORAP35398 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RORAP35398 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.98■□□□□ 0.47
RORAP35398 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.98■□□□□ 0.47
RORAP35398 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.98■□□□□ 0.47
RORAP35398 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RORAP35398 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RORAP35398 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.98■□□□□ 0.47
RORAP35398 POLI-202ENST00000406285 2030 ntTSL 2 BASIC17.98■□□□□ 0.47
RORAP35398 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
RORAP35398 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
RORAP35398 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
RORAP35398 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RORAP35398 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RORAP35398 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RORAP35398 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.97■□□□□ 0.47
RORAP35398 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
RORAP35398 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC17.97■□□□□ 0.47
RORAP35398 COPE-203ENST00000351079 907 ntTSL 2 BASIC17.97■□□□□ 0.47
RORAP35398 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RORAP35398 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.97■□□□□ 0.47
RORAP35398 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.97■□□□□ 0.47
RORAP35398 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RORAP35398 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC17.97■□□□□ 0.47
RORAP35398 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.97■□□□□ 0.47
RORAP35398 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.97■□□□□ 0.47
RORAP35398 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.97■□□□□ 0.47
RORAP35398 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC17.97■□□□□ 0.47
RORAP35398 MIR4674-201ENST00000582457 87 ntBASIC17.97■□□□□ 0.47
RORAP35398 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RORAP35398 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC17.97■□□□□ 0.47
RORAP35398 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RORAP35398 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
RORAP35398 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RORAP35398 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RORAP35398 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.97■□□□□ 0.47
RORAP35398 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
RORAP35398 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RORAP35398 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
RORAP35398 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
RORAP35398 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC17.97■□□□□ 0.47
RORAP35398 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
RORAP35398 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
RORAP35398 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.96■□□□□ 0.47
RORAP35398 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.96■□□□□ 0.47
RORAP35398 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.96■□□□□ 0.47
RORAP35398 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
RORAP35398 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RORAP35398 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RORAP35398 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.96■□□□□ 0.47
RORAP35398 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.96■□□□□ 0.47
RORAP35398 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC17.96■□□□□ 0.47
RORAP35398 AL441883.1-201ENST00000566170 1045 ntBASIC17.96■□□□□ 0.47
RORAP35398 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.96■□□□□ 0.47
RORAP35398 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RORAP35398 AL023973.1-201ENST00000624619 620 ntBASIC17.96■□□□□ 0.47
RORAP35398 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RORAP35398 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.96■□□□□ 0.47
RORAP35398 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
RORAP35398 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RORAP35398 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
RORAP35398 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
RORAP35398 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RORAP35398 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
RORAP35398 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
RORAP35398 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RORAP35398 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
RORAP35398 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
RORAP35398 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC17.96■□□□□ 0.46
RORAP35398 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RORAP35398 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RORAP35398 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.95■□□□□ 0.46
RORAP35398 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RORAP35398 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RORAP35398 AL031133.1-201ENST00000406807 723 ntBASIC17.95■□□□□ 0.46
RORAP35398 HOMER2P1-201ENST00000455653 964 ntBASIC17.95■□□□□ 0.46
RORAP35398 AC092647.4-201ENST00000457211 535 ntBASIC17.95■□□□□ 0.46
RORAP35398 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.95■□□□□ 0.46
RORAP35398 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.95■□□□□ 0.46
RORAP35398 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.95■□□□□ 0.46
RORAP35398 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
RORAP35398 NT5C-210ENST00000582160 860 ntTSL 2 BASIC17.95■□□□□ 0.46
RORAP35398 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RORAP35398 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
RORAP35398 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
RORAP35398 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.95■□□□□ 0.46
RORAP35398 MED25-212ENST00000618715 1467 ntTSL 5 BASIC17.95■□□□□ 0.46
RORAP35398 FA2H-201ENST00000219368 2424 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RORAP35398 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC17.94■□□□□ 0.46
RORAP35398 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
RORAP35398 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
RORAP35398 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
RORAP35398 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RORAP35398 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
RORAP35398 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms