Protein–RNA interactions for Protein: P33897

ABCD1, ATP-binding cassette sub-family D member 1, humanhuman

Predictions only

Length 745 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD1P33897 AP003041.3-201ENST00000527151 707 ntBASIC20.7■□□□□ 0.9
ABCD1P33897 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC20.7■□□□□ 0.9
ABCD1P33897 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC20.7■□□□□ 0.9
ABCD1P33897 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.7■□□□□ 0.9
ABCD1P33897 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.7■□□□□ 0.9
ABCD1P33897 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ABCD1P33897 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ABCD1P33897 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ABCD1P33897 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC20.7■□□□□ 0.9
ABCD1P33897 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC20.7■□□□□ 0.9
ABCD1P33897 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
ABCD1P33897 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.7■□□□□ 0.9
ABCD1P33897 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ABCD1P33897 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ABCD1P33897 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC20.69■□□□□ 0.9
ABCD1P33897 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.69■□□□□ 0.9
ABCD1P33897 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
ABCD1P33897 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.69■□□□□ 0.9
ABCD1P33897 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ABCD1P33897 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ABCD1P33897 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ABCD1P33897 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ABCD1P33897 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
ABCD1P33897 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ABCD1P33897 MCCD1P1-208ENST00000445732 328 ntBASIC20.69■□□□□ 0.9
ABCD1P33897 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC20.69■□□□□ 0.9
ABCD1P33897 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.69■□□□□ 0.9
ABCD1P33897 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
ABCD1P33897 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
ABCD1P33897 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ABCD1P33897 MTSS1L-201ENST00000338779 4992 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ABCD1P33897 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ABCD1P33897 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ABCD1P33897 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ABCD1P33897 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
ABCD1P33897 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC20.69■□□□□ 0.9
ABCD1P33897 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ABCD1P33897 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC20.69■□□□□ 0.9
ABCD1P33897 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC20.69■□□□□ 0.9
ABCD1P33897 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
ABCD1P33897 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
ABCD1P33897 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ABCD1P33897 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ABCD1P33897 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ABCD1P33897 EML3-217ENST00000531557 2509 ntTSL 5 BASIC20.68■□□□□ 0.9
ABCD1P33897 TBC1D3P2-202ENST00000577902 1649 ntBASIC20.68■□□□□ 0.9
ABCD1P33897 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
ABCD1P33897 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.68■□□□□ 0.9
ABCD1P33897 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ABCD1P33897 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ABCD1P33897 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ABCD1P33897 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
ABCD1P33897 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
ABCD1P33897 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ABCD1P33897 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
ABCD1P33897 AC133561.5-201ENST00000635547 218 ntBASIC20.68■□□□□ 0.9
ABCD1P33897 AC068587.9-201ENST00000641814 219 ntBASIC20.68■□□□□ 0.9
ABCD1P33897 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ABCD1P33897 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC20.68■□□□□ 0.9
ABCD1P33897 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
ABCD1P33897 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ABCD1P33897 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.68■□□□□ 0.9
ABCD1P33897 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ABCD1P33897 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ABCD1P33897 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ABCD1P33897 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ABCD1P33897 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ABCD1P33897 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ABCD1P33897 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ABCD1P33897 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC20.67■□□□□ 0.9
ABCD1P33897 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ABCD1P33897 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
ABCD1P33897 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ABCD1P33897 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
ABCD1P33897 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
ABCD1P33897 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ABCD1P33897 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.67■□□□□ 0.9
ABCD1P33897 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ABCD1P33897 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
ABCD1P33897 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC20.67■□□□□ 0.9
ABCD1P33897 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.67■□□□□ 0.9
ABCD1P33897 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ABCD1P33897 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.67■□□□□ 0.9
ABCD1P33897 AL158151.3-201ENST00000599172 696 ntTSL 5 BASIC20.67■□□□□ 0.9
ABCD1P33897 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
ABCD1P33897 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ABCD1P33897 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ABCD1P33897 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
ABCD1P33897 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC20.67■□□□□ 0.9
ABCD1P33897 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
ABCD1P33897 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ABCD1P33897 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.67■□□□□ 0.9
ABCD1P33897 HEIH-201ENST00000623091 1652 ntBASIC20.67■□□□□ 0.9
ABCD1P33897 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ABCD1P33897 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.66■□□□□ 0.9
ABCD1P33897 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ABCD1P33897 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.66■□□□□ 0.9
ABCD1P33897 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ABCD1P33897 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ABCD1P33897 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms