Protein–RNA interactions for Protein: P29350

PTPN6, Tyrosine-protein phosphatase non-receptor type 6, humanhuman

Predictions only

Length 595 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN6P29350 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN6P29350 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PTPN6P29350 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PTPN6P29350 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN6P29350 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN6P29350 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.98■□□□□ 0.47
PTPN6P29350 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.98■□□□□ 0.47
PTPN6P29350 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN6P29350 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN6P29350 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC17.98■□□□□ 0.47
PTPN6P29350 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN6P29350 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC17.98■□□□□ 0.47
PTPN6P29350 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC17.98■□□□□ 0.47
PTPN6P29350 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PTPN6P29350 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC17.97■□□□□ 0.47
PTPN6P29350 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC17.97■□□□□ 0.47
PTPN6P29350 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.97■□□□□ 0.47
PTPN6P29350 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.97■□□□□ 0.47
PTPN6P29350 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN6P29350 AL354751.1-201ENST00000412768 1863 ntBASIC17.97■□□□□ 0.47
PTPN6P29350 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC17.97■□□□□ 0.47
PTPN6P29350 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN6P29350 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.97■□□□□ 0.47
PTPN6P29350 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC17.97■□□□□ 0.47
PTPN6P29350 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN6P29350 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN6P29350 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.97■□□□□ 0.47
PTPN6P29350 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.97■□□□□ 0.47
PTPN6P29350 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN6P29350 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN6P29350 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC17.97■□□□□ 0.47
PTPN6P29350 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN6P29350 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
PTPN6P29350 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.97■□□□□ 0.47
PTPN6P29350 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN6P29350 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN6P29350 TSPY21P-201ENST00000433481 731 ntBASIC17.97■□□□□ 0.47
PTPN6P29350 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
PTPN6P29350 F2R-202ENST00000505600 442 ntTSL 2 BASIC17.97■□□□□ 0.47
PTPN6P29350 AC008550.1-201ENST00000511500 884 ntBASIC17.97■□□□□ 0.47
PTPN6P29350 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN6P29350 DHRS4-206ENST00000558581 1143 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN6P29350 AC044860.1-201ENST00000560756 1160 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN6P29350 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.97■□□□□ 0.47
PTPN6P29350 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN6P29350 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
PTPN6P29350 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN6P29350 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN6P29350 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN6P29350 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.97■□□□□ 0.47
PTPN6P29350 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PTPN6P29350 AC120498.9-201ENST00000339021 3867 ntBASIC17.97■□□□□ 0.47
PTPN6P29350 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC17.96■□□□□ 0.47
PTPN6P29350 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PTPN6P29350 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.96■□□□□ 0.47
PTPN6P29350 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
PTPN6P29350 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC17.96■□□□□ 0.47
PTPN6P29350 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC17.96■□□□□ 0.47
PTPN6P29350 ATP1B1-202ENST00000367816 2608 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
PTPN6P29350 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC17.96■□□□□ 0.47
PTPN6P29350 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPN6P29350 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
PTPN6P29350 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.96■□□□□ 0.47
PTPN6P29350 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC17.96■□□□□ 0.47
PTPN6P29350 TSPY23P-201ENST00000440136 739 ntBASIC17.96■□□□□ 0.47
PTPN6P29350 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPN6P29350 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.96■□□□□ 0.47
PTPN6P29350 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.96■□□□□ 0.47
PTPN6P29350 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.96■□□□□ 0.47
PTPN6P29350 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC17.96■□□□□ 0.47
PTPN6P29350 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPN6P29350 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPN6P29350 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPN6P29350 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPN6P29350 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.96■□□□□ 0.47
PTPN6P29350 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PTPN6P29350 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PTPN6P29350 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC17.96■□□□□ 0.47
PTPN6P29350 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC17.96■□□□□ 0.47
PTPN6P29350 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PTPN6P29350 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
PTPN6P29350 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.46
PTPN6P29350 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
PTPN6P29350 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN6P29350 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
PTPN6P29350 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN6P29350 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN6P29350 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC17.95■□□□□ 0.46
PTPN6P29350 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN6P29350 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN6P29350 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.95■□□□□ 0.46
PTPN6P29350 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN6P29350 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC17.95■□□□□ 0.46
PTPN6P29350 C1QL1P1-201ENST00000568105 661 ntBASIC17.95■□□□□ 0.46
PTPN6P29350 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.95■□□□□ 0.46
PTPN6P29350 CABP2-204ENST00000636477 941 ntTSL 5 BASIC17.95■□□□□ 0.46
PTPN6P29350 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
PTPN6P29350 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC17.95■□□□□ 0.46
PTPN6P29350 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.95■□□□□ 0.46
PTPN6P29350 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms