Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ABCD3P28288 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.44■□□□□ 0.38
ABCD3P28288 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ABCD3P28288 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.44■□□□□ 0.38
ABCD3P28288 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC17.44■□□□□ 0.38
ABCD3P28288 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ABCD3P28288 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ABCD3P28288 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ABCD3P28288 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC17.44■□□□□ 0.38
ABCD3P28288 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ABCD3P28288 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ABCD3P28288 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ABCD3P28288 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ABCD3P28288 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.44■□□□□ 0.38
ABCD3P28288 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ABCD3P28288 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ABCD3P28288 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
ABCD3P28288 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC17.44■□□□□ 0.38
ABCD3P28288 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.44■□□□□ 0.38
ABCD3P28288 AC128688.1-201ENST00000487626 519 ntBASIC17.44■□□□□ 0.38
ABCD3P28288 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
ABCD3P28288 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC17.44■□□□□ 0.38
ABCD3P28288 AL353719.1-201ENST00000566847 864 ntBASIC17.44■□□□□ 0.38
ABCD3P28288 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ABCD3P28288 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC17.44■□□□□ 0.38
ABCD3P28288 AC012306.2-201ENST00000609350 630 ntBASIC17.44■□□□□ 0.38
ABCD3P28288 AC097493.4-201ENST00000641197 219 ntBASIC17.44■□□□□ 0.38
ABCD3P28288 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ABCD3P28288 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ABCD3P28288 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ABCD3P28288 AL020996.1-203ENST00000536896 2307 ntBASIC17.44■□□□□ 0.38
ABCD3P28288 AC092338.2-201ENST00000568827 1415 ntBASIC17.44■□□□□ 0.38
ABCD3P28288 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
ABCD3P28288 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC17.44■□□□□ 0.38
ABCD3P28288 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
ABCD3P28288 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ABCD3P28288 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
ABCD3P28288 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
ABCD3P28288 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.44■□□□□ 0.38
ABCD3P28288 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
ABCD3P28288 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
ABCD3P28288 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ABCD3P28288 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
ABCD3P28288 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ABCD3P28288 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ABCD3P28288 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ABCD3P28288 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
ABCD3P28288 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
ABCD3P28288 HSCB-201ENST00000216027 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ABCD3P28288 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC17.43■□□□□ 0.38
ABCD3P28288 INGX-201ENST00000359239 846 ntBASIC17.43■□□□□ 0.38
ABCD3P28288 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ABCD3P28288 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
ABCD3P28288 AL445685.1-201ENST00000425802 762 ntTSL 3 BASIC17.43■□□□□ 0.38
ABCD3P28288 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ABCD3P28288 LINC01023-201ENST00000606054 436 ntBASIC17.43■□□□□ 0.38
ABCD3P28288 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
ABCD3P28288 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ABCD3P28288 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
ABCD3P28288 KRT18P22-201ENST00000402024 1347 ntBASIC17.43■□□□□ 0.38
ABCD3P28288 KATNBL1P6-202ENST00000562413 1466 ntBASIC17.43■□□□□ 0.38
ABCD3P28288 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC17.43■□□□□ 0.38
ABCD3P28288 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
ABCD3P28288 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.42■□□□□ 0.38
ABCD3P28288 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ABCD3P28288 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC17.42■□□□□ 0.38
ABCD3P28288 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
ABCD3P28288 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ABCD3P28288 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.42■□□□□ 0.38
ABCD3P28288 BUB3-202ENST00000368859 667 ntTSL 3 BASIC17.42■□□□□ 0.38
ABCD3P28288 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.42■□□□□ 0.38
ABCD3P28288 AC007663.1-201ENST00000438948 1240 ntBASIC17.42■□□□□ 0.38
ABCD3P28288 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC17.42■□□□□ 0.38
ABCD3P28288 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ABCD3P28288 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ABCD3P28288 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ABCD3P28288 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
ABCD3P28288 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC17.42■□□□□ 0.38
ABCD3P28288 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
ABCD3P28288 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ABCD3P28288 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
ABCD3P28288 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ABCD3P28288 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.41■□□□□ 0.38
ABCD3P28288 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ABCD3P28288 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC17.41■□□□□ 0.38
ABCD3P28288 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ABCD3P28288 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC17.41■□□□□ 0.38
ABCD3P28288 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
ABCD3P28288 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ABCD3P28288 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ABCD3P28288 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC17.41■□□□□ 0.38
ABCD3P28288 ECEL1P3-201ENST00000427961 737 ntBASIC17.41■□□□□ 0.38
ABCD3P28288 ECEL1P2-202ENST00000465689 757 ntBASIC17.41■□□□□ 0.38
ABCD3P28288 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC17.41■□□□□ 0.38
ABCD3P28288 AP003041.3-201ENST00000527151 707 ntBASIC17.41■□□□□ 0.38
ABCD3P28288 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.41■□□□□ 0.38
ABCD3P28288 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ABCD3P28288 AC010653.2-201ENST00000623505 997 ntBASIC17.41■□□□□ 0.38
ABCD3P28288 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
ABCD3P28288 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms