Protein–RNA interactions for Protein: P20648

ATP4A, Potassium-transporting ATPase alpha chain 1, humanhuman

Predictions only

Length 1,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP4AP20648 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
ATP4AP20648 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC21.02■□□□□ 0.96
ATP4AP20648 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP4AP20648 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
ATP4AP20648 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC21.02■□□□□ 0.95
ATP4AP20648 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.02■□□□□ 0.95
ATP4AP20648 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC21.02■□□□□ 0.95
ATP4AP20648 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC21.02■□□□□ 0.95
ATP4AP20648 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
ATP4AP20648 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC21.01■□□□□ 0.95
ATP4AP20648 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP4AP20648 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP4AP20648 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP4AP20648 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP4AP20648 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP4AP20648 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC21.01■□□□□ 0.95
ATP4AP20648 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC21.01■□□□□ 0.95
ATP4AP20648 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC21.01■□□□□ 0.95
ATP4AP20648 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP4AP20648 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ATP4AP20648 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC21.01■□□□□ 0.95
ATP4AP20648 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ATP4AP20648 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ATP4AP20648 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
ATP4AP20648 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC21.01■□□□□ 0.95
ATP4AP20648 ISCU-203ENST00000431221 799 ntTSL 2 BASIC21.01■□□□□ 0.95
ATP4AP20648 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC21.01■□□□□ 0.95
ATP4AP20648 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC21.01■□□□□ 0.95
ATP4AP20648 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC21.01■□□□□ 0.95
ATP4AP20648 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC21.01■□□□□ 0.95
ATP4AP20648 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC21.01■□□□□ 0.95
ATP4AP20648 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC21.01■□□□□ 0.95
ATP4AP20648 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
ATP4AP20648 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC21■□□□□ 0.95
ATP4AP20648 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
ATP4AP20648 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC21■□□□□ 0.95
ATP4AP20648 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC21■□□□□ 0.95
ATP4AP20648 MCC-208ENST00000514701 2855 ntTSL 2 BASIC21■□□□□ 0.95
ATP4AP20648 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ATP4AP20648 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC21■□□□□ 0.95
ATP4AP20648 AL512353.2-201ENST00000448759 1962 ntBASIC21■□□□□ 0.95
ATP4AP20648 ILDR2-203ENST00000469934 1950 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
ATP4AP20648 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ATP4AP20648 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC21■□□□□ 0.95
ATP4AP20648 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC21■□□□□ 0.95
ATP4AP20648 AL359075.1-203ENST00000462729 1002 ntBASIC21■□□□□ 0.95
ATP4AP20648 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC21■□□□□ 0.95
ATP4AP20648 DFFB-212ENST00000625756 649 ntTSL 5 BASIC21■□□□□ 0.95
ATP4AP20648 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
ATP4AP20648 AC036111.1-201ENST00000533973 1582 ntBASIC21■□□□□ 0.95
ATP4AP20648 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
ATP4AP20648 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
ATP4AP20648 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC21■□□□□ 0.95
ATP4AP20648 FP475955.4-201ENST00000623131 1990 ntBASIC20.99■□□□□ 0.95
ATP4AP20648 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP4AP20648 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC20.99■□□□□ 0.95
ATP4AP20648 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP4AP20648 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ATP4AP20648 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.99■□□□□ 0.95
ATP4AP20648 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.99■□□□□ 0.95
ATP4AP20648 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC20.99■□□□□ 0.95
ATP4AP20648 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
ATP4AP20648 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP4AP20648 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC20.99■□□□□ 0.95
ATP4AP20648 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.99■□□□□ 0.95
ATP4AP20648 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC20.99■□□□□ 0.95
ATP4AP20648 SNX5-210ENST00000481323 562 ntTSL 3 BASIC20.99■□□□□ 0.95
ATP4AP20648 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC20.99■□□□□ 0.95
ATP4AP20648 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC20.99■□□□□ 0.95
ATP4AP20648 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP4AP20648 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP4AP20648 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
ATP4AP20648 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
ATP4AP20648 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATP4AP20648 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC20.98■□□□□ 0.95
ATP4AP20648 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ATP4AP20648 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC20.98■□□□□ 0.95
ATP4AP20648 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC20.98■□□□□ 0.95
ATP4AP20648 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATP4AP20648 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATP4AP20648 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC20.98■□□□□ 0.95
ATP4AP20648 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ATP4AP20648 CLN6-204ENST00000564752 900 ntTSL 3 BASIC20.98■□□□□ 0.95
ATP4AP20648 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ATP4AP20648 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC20.98■□□□□ 0.95
ATP4AP20648 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
ATP4AP20648 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC20.98■□□□□ 0.95
ATP4AP20648 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.98■□□□□ 0.95
ATP4AP20648 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
ATP4AP20648 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATP4AP20648 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
ATP4AP20648 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC20.98■□□□□ 0.95
ATP4AP20648 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC20.98■□□□□ 0.95
ATP4AP20648 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC20.98■□□□□ 0.95
ATP4AP20648 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATP4AP20648 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC20.97■□□□□ 0.95
ATP4AP20648 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC20.97■□□□□ 0.95
ATP4AP20648 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
ATP4AP20648 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
ATP4AP20648 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms