Protein–RNA interactions for Protein: P20036

HLA-DPA1, HLA class II histocompatibility antigen, DP alpha 1 chain, humanhuman

Predictions only

Length 260 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1P20036 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.13■□□□□ 0.65
HLA-DPA1P20036 MIR4785-201ENST00000585005 73 ntBASIC19.13■□□□□ 0.65
HLA-DPA1P20036 REXO1L10P-201ENST00000615707 1290 ntBASIC19.13■□□□□ 0.65
HLA-DPA1P20036 REXO1L12P-201ENST00000622156 912 ntBASIC19.13■□□□□ 0.65
HLA-DPA1P20036 AC096733.2-201ENST00000609937 1394 ntBASIC19.13■□□□□ 0.65
HLA-DPA1P20036 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DPA1P20036 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DPA1P20036 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DPA1P20036 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
HLA-DPA1P20036 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DPA1P20036 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC19.13■□□□□ 0.65
HLA-DPA1P20036 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DPA1P20036 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.13■□□□□ 0.65
HLA-DPA1P20036 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
HLA-DPA1P20036 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DPA1P20036 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
HLA-DPA1P20036 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.12■□□□□ 0.65
HLA-DPA1P20036 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DPA1P20036 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DPA1P20036 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DPA1P20036 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DPA1P20036 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DPA1P20036 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.12■□□□□ 0.65
HLA-DPA1P20036 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.12■□□□□ 0.65
HLA-DPA1P20036 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.12■□□□□ 0.65
HLA-DPA1P20036 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.12■□□□□ 0.65
HLA-DPA1P20036 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC19.12■□□□□ 0.65
HLA-DPA1P20036 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.12■□□□□ 0.65
HLA-DPA1P20036 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.12■□□□□ 0.65
HLA-DPA1P20036 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
HLA-DPA1P20036 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
HLA-DPA1P20036 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DPA1P20036 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DPA1P20036 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
HLA-DPA1P20036 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DPA1P20036 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
HLA-DPA1P20036 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
HLA-DPA1P20036 AC007192.1-201ENST00000593731 5142 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
HLA-DPA1P20036 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DPA1P20036 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
HLA-DPA1P20036 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.11■□□□□ 0.65
HLA-DPA1P20036 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DPA1P20036 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DPA1P20036 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DPA1P20036 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
HLA-DPA1P20036 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC19.11■□□□□ 0.65
HLA-DPA1P20036 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC19.11■□□□□ 0.65
HLA-DPA1P20036 AP003071.4-201ENST00000562276 1284 ntBASIC19.11■□□□□ 0.65
HLA-DPA1P20036 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.11■□□□□ 0.65
HLA-DPA1P20036 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DPA1P20036 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
HLA-DPA1P20036 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DPA1P20036 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DPA1P20036 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.11■□□□□ 0.65
HLA-DPA1P20036 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DPA1P20036 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
HLA-DPA1P20036 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.1■□□□□ 0.65
HLA-DPA1P20036 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DPA1P20036 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
HLA-DPA1P20036 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
HLA-DPA1P20036 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.1■□□□□ 0.65
HLA-DPA1P20036 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DPA1P20036 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DPA1P20036 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.1■□□□□ 0.65
HLA-DPA1P20036 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DPA1P20036 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DPA1P20036 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DPA1P20036 TSPY7P-201ENST00000431358 1114 ntBASIC19.1■□□□□ 0.65
HLA-DPA1P20036 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DPA1P20036 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.1■□□□□ 0.65
HLA-DPA1P20036 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.1■□□□□ 0.65
HLA-DPA1P20036 AC083906.6-201ENST00000641366 219 ntBASIC19.1■□□□□ 0.65
HLA-DPA1P20036 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DPA1P20036 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DPA1P20036 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DPA1P20036 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DPA1P20036 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
HLA-DPA1P20036 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
HLA-DPA1P20036 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.09■□□□□ 0.65
HLA-DPA1P20036 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DPA1P20036 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DPA1P20036 KRT8P3-201ENST00000519669 1449 ntBASIC19.09■□□□□ 0.65
HLA-DPA1P20036 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC19.09■□□□□ 0.65
HLA-DPA1P20036 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DPA1P20036 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.09■□□□□ 0.65
HLA-DPA1P20036 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DPA1P20036 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC19.09■□□□□ 0.65
HLA-DPA1P20036 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.09■□□□□ 0.65
HLA-DPA1P20036 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DPA1P20036 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DPA1P20036 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DPA1P20036 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC19.09■□□□□ 0.65
HLA-DPA1P20036 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
HLA-DPA1P20036 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DPA1P20036 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.09■□□□□ 0.65
HLA-DPA1P20036 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.09■□□□□ 0.65
HLA-DPA1P20036 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.09■□□□□ 0.65
HLA-DPA1P20036 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.09■□□□□ 0.65
HLA-DPA1P20036 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
HLA-DPA1P20036 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms