Protein–RNA interactions for Protein: P19256

CD58, Lymphocyte function-associated antigen 3, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD58P19256 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.33■□□□□ 0.84
CD58P19256 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CD58P19256 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
CD58P19256 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.84
CD58P19256 CAPZB-202ENST00000264203 2068 ntTSL 2 BASIC20.33■□□□□ 0.84
CD58P19256 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CD58P19256 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CD58P19256 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CD58P19256 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CD58P19256 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CD58P19256 AC004408.2-201ENST00000623613 2777 ntBASIC20.32■□□□□ 0.84
CD58P19256 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CD58P19256 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC20.32■□□□□ 0.84
CD58P19256 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CD58P19256 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CD58P19256 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CD58P19256 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC20.32■□□□□ 0.84
CD58P19256 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC20.32■□□□□ 0.84
CD58P19256 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CD58P19256 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.32■□□□□ 0.84
CD58P19256 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CD58P19256 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CD58P19256 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC20.32■□□□□ 0.84
CD58P19256 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CD58P19256 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
CD58P19256 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CD58P19256 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC20.32■□□□□ 0.84
CD58P19256 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CD58P19256 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
CD58P19256 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CD58P19256 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CD58P19256 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CD58P19256 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CD58P19256 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CD58P19256 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC20.31■□□□□ 0.84
CD58P19256 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
CD58P19256 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC20.31■□□□□ 0.84
CD58P19256 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CD58P19256 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CD58P19256 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC20.31■□□□□ 0.84
CD58P19256 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CD58P19256 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.31■□□□□ 0.84
CD58P19256 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CD58P19256 PRR31-201ENST00000371629 978 ntTSL 2 BASIC20.31■□□□□ 0.84
CD58P19256 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.31■□□□□ 0.84
CD58P19256 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC20.31■□□□□ 0.84
CD58P19256 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.31■□□□□ 0.84
CD58P19256 FITM1-202ENST00000559294 800 ntBASIC20.31■□□□□ 0.84
CD58P19256 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CD58P19256 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC20.31■□□□□ 0.84
CD58P19256 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC20.31■□□□□ 0.84
CD58P19256 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CD58P19256 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC20.31■□□□□ 0.84
CD58P19256 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.31■□□□□ 0.84
CD58P19256 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
CD58P19256 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC20.31■□□□□ 0.84
CD58P19256 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CD58P19256 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CD58P19256 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC20.31■□□□□ 0.84
CD58P19256 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CD58P19256 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC20.3■□□□□ 0.84
CD58P19256 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
CD58P19256 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CD58P19256 KRT8P9-201ENST00000558927 1449 ntBASIC20.3■□□□□ 0.84
CD58P19256 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC20.3■□□□□ 0.84
CD58P19256 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CD58P19256 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC20.3■□□□□ 0.84
CD58P19256 AP005242.2-201ENST00000580065 1175 ntBASIC20.3■□□□□ 0.84
CD58P19256 SPINK2-206ENST00000618802 608 ntTSL 3 BASIC20.3■□□□□ 0.84
CD58P19256 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CD58P19256 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CD58P19256 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
CD58P19256 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CD58P19256 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
CD58P19256 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
CD58P19256 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CD58P19256 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
CD58P19256 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
CD58P19256 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.29■□□□□ 0.84
CD58P19256 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CD58P19256 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CD58P19256 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC20.29■□□□□ 0.84
CD58P19256 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CD58P19256 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
CD58P19256 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC20.29■□□□□ 0.84
CD58P19256 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC20.29■□□□□ 0.84
CD58P19256 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC20.29■□□□□ 0.84
CD58P19256 BX088651.1-201ENST00000540551 451 ntBASIC20.29■□□□□ 0.84
CD58P19256 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
CD58P19256 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC20.29■□□□□ 0.84
CD58P19256 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
CD58P19256 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.29■□□□□ 0.84
CD58P19256 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CD58P19256 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CD58P19256 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
CD58P19256 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CD58P19256 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CD58P19256 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
CD58P19256 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
CD58P19256 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms