Protein–RNA interactions for Protein: P0CG48

UBC, Polyubiquitin-C, humanhuman

Known RBP Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBCP0CG48 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC16.61■□□□□ 0.25
UBCP0CG48 RGMA-211ENST00000557420 989 ntTSL 3 BASIC16.61■□□□□ 0.25
UBCP0CG48 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC16.61■□□□□ 0.25
UBCP0CG48 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.61■□□□□ 0.25
UBCP0CG48 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBCP0CG48 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBCP0CG48 AC133041.1-202ENST00000642053 222 ntBASIC16.61■□□□□ 0.25
UBCP0CG48 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBCP0CG48 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBCP0CG48 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBCP0CG48 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBCP0CG48 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBCP0CG48 AATK-AS1-203ENST00000637878 1306 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
UBCP0CG48 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
UBCP0CG48 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
UBCP0CG48 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.61■□□□□ 0.25
UBCP0CG48 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
UBCP0CG48 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC16.61■□□□□ 0.25
UBCP0CG48 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBCP0CG48 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBCP0CG48 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBCP0CG48 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
UBCP0CG48 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC16.6■□□□□ 0.25
UBCP0CG48 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC16.6■□□□□ 0.25
UBCP0CG48 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBCP0CG48 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBCP0CG48 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC16.6■□□□□ 0.25
UBCP0CG48 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC16.6■□□□□ 0.25
UBCP0CG48 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
UBCP0CG48 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBCP0CG48 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC16.6■□□□□ 0.25
UBCP0CG48 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.6■□□□□ 0.25
UBCP0CG48 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBCP0CG48 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBCP0CG48 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBCP0CG48 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBCP0CG48 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
UBCP0CG48 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
UBCP0CG48 MAP2K4P1-201ENST00000438453 1195 ntBASIC16.6■□□□□ 0.25
UBCP0CG48 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC16.6■□□□□ 0.25
UBCP0CG48 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC16.6■□□□□ 0.25
UBCP0CG48 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC16.6■□□□□ 0.25
UBCP0CG48 AC098934.4-201ENST00000564127 592 ntBASIC16.6■□□□□ 0.25
UBCP0CG48 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC16.6■□□□□ 0.25
UBCP0CG48 INO80E-214ENST00000620599 515 ntTSL 2 BASIC16.6■□□□□ 0.25
UBCP0CG48 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
UBCP0CG48 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBCP0CG48 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
UBCP0CG48 AAED1-201ENST00000375234 2863 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBCP0CG48 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
UBCP0CG48 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC16.6■□□□□ 0.25
UBCP0CG48 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC16.6■□□□□ 0.25
UBCP0CG48 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBCP0CG48 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBCP0CG48 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBCP0CG48 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBCP0CG48 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBCP0CG48 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.6■□□□□ 0.25
UBCP0CG48 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBCP0CG48 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
UBCP0CG48 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
UBCP0CG48 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.59■□□□□ 0.25
UBCP0CG48 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBCP0CG48 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
UBCP0CG48 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBCP0CG48 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBCP0CG48 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC16.59■□□□□ 0.25
UBCP0CG48 ANO7L1-203ENST00000602586 1720 ntBASIC16.59■□□□□ 0.25
UBCP0CG48 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBCP0CG48 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBCP0CG48 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.59■□□□□ 0.25
UBCP0CG48 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBCP0CG48 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC16.59■□□□□ 0.25
UBCP0CG48 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBCP0CG48 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBCP0CG48 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBCP0CG48 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
UBCP0CG48 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC16.59■□□□□ 0.25
UBCP0CG48 AC069152.1-201ENST00000438030 544 ntBASIC16.59■□□□□ 0.25
UBCP0CG48 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC16.59■□□□□ 0.25
UBCP0CG48 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC16.59■□□□□ 0.25
UBCP0CG48 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC16.59■□□□□ 0.25
UBCP0CG48 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBCP0CG48 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBCP0CG48 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBCP0CG48 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
UBCP0CG48 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
UBCP0CG48 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBCP0CG48 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC16.59■□□□□ 0.25
UBCP0CG48 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
UBCP0CG48 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.59■□□□□ 0.25
UBCP0CG48 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.59■□□□□ 0.25
UBCP0CG48 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
UBCP0CG48 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBCP0CG48 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
UBCP0CG48 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
UBCP0CG48 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.58■□□□□ 0.25
UBCP0CG48 AC135050.7-201ENST00000624508 2218 ntBASIC16.58■□□□□ 0.25
UBCP0CG48 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
UBCP0CG48 PCDHB18P-201ENST00000524813 2368 ntBASIC16.58■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms