Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HTR1AP08908 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HTR1AP08908 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC17.28■□□□□ 0.36
HTR1AP08908 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HTR1AP08908 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HTR1AP08908 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HTR1AP08908 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
HTR1AP08908 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC17.28■□□□□ 0.36
HTR1AP08908 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HTR1AP08908 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
HTR1AP08908 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.28■□□□□ 0.36
HTR1AP08908 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HTR1AP08908 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HTR1AP08908 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HTR1AP08908 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HTR1AP08908 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC17.28■□□□□ 0.36
HTR1AP08908 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC17.28■□□□□ 0.36
HTR1AP08908 AC137761.2-201ENST00000561729 223 ntBASIC17.28■□□□□ 0.36
HTR1AP08908 AC145350.3-201ENST00000569033 163 ntBASIC17.28■□□□□ 0.36
HTR1AP08908 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
HTR1AP08908 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HTR1AP08908 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HTR1AP08908 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.28■□□□□ 0.36
HTR1AP08908 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HTR1AP08908 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HTR1AP08908 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HTR1AP08908 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.28■□□□□ 0.36
HTR1AP08908 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HTR1AP08908 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.28■□□□□ 0.36
HTR1AP08908 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HTR1AP08908 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HTR1AP08908 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
HTR1AP08908 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.28■□□□□ 0.36
HTR1AP08908 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
HTR1AP08908 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC17.28■□□□□ 0.36
HTR1AP08908 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HTR1AP08908 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.28■□□□□ 0.36
HTR1AP08908 WDFY4-202ENST00000360890 2193 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
HTR1AP08908 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.28■□□□□ 0.36
HTR1AP08908 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HTR1AP08908 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
HTR1AP08908 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
HTR1AP08908 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HTR1AP08908 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HTR1AP08908 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HTR1AP08908 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.36
HTR1AP08908 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.27■□□□□ 0.36
HTR1AP08908 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.27■□□□□ 0.36
HTR1AP08908 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HTR1AP08908 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC17.27■□□□□ 0.36
HTR1AP08908 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.27■□□□□ 0.36
HTR1AP08908 GUK1-205ENST00000366722 850 ntTSL 3 BASIC17.27■□□□□ 0.36
HTR1AP08908 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.27■□□□□ 0.36
HTR1AP08908 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC17.27■□□□□ 0.36
HTR1AP08908 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
HTR1AP08908 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC17.27■□□□□ 0.36
HTR1AP08908 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC17.27■□□□□ 0.36
HTR1AP08908 CYP2T3P-201ENST00000601990 817 ntBASIC17.27■□□□□ 0.36
HTR1AP08908 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC17.27■□□□□ 0.36
HTR1AP08908 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
HTR1AP08908 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HTR1AP08908 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
HTR1AP08908 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC17.27■□□□□ 0.36
HTR1AP08908 TNRC18P3-201ENST00000441896 2691 ntBASIC17.27■□□□□ 0.35
HTR1AP08908 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC17.27■□□□□ 0.35
HTR1AP08908 AC068338.2-201ENST00000563278 1430 ntBASIC17.27■□□□□ 0.35
HTR1AP08908 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HTR1AP08908 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC17.27■□□□□ 0.35
HTR1AP08908 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC17.27■□□□□ 0.35
HTR1AP08908 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
HTR1AP08908 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC17.27■□□□□ 0.35
HTR1AP08908 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HTR1AP08908 AC080080.1-201ENST00000625121 2420 ntBASIC17.27■□□□□ 0.35
HTR1AP08908 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
HTR1AP08908 FEM1AP3-201ENST00000403722 1741 ntBASIC17.27■□□□□ 0.35
HTR1AP08908 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.27■□□□□ 0.35
HTR1AP08908 GNAS-203ENST00000306120 1878 ntBASIC17.27■□□□□ 0.35
HTR1AP08908 AC124067.4-201ENST00000519691 2379 ntBASIC17.26■□□□□ 0.35
HTR1AP08908 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HTR1AP08908 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HTR1AP08908 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.26■□□□□ 0.35
HTR1AP08908 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.26■□□□□ 0.35
HTR1AP08908 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HTR1AP08908 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HTR1AP08908 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
HTR1AP08908 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.26■□□□□ 0.35
HTR1AP08908 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HTR1AP08908 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
HTR1AP08908 GPX1-202ENST00000419783 1146 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HTR1AP08908 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HTR1AP08908 AC023632.3-201ENST00000521633 145 ntBASIC17.26■□□□□ 0.35
HTR1AP08908 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.26■□□□□ 0.35
HTR1AP08908 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
HTR1AP08908 AC069236.1-201ENST00000604339 616 ntBASIC17.26■□□□□ 0.35
HTR1AP08908 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
HTR1AP08908 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
HTR1AP08908 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC17.26■□□□□ 0.35
HTR1AP08908 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
HTR1AP08908 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.26■□□□□ 0.35
HTR1AP08908 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms