Protein–RNA interactions for Protein: P04234

CD3D, T-cell surface glycoprotein CD3 delta chain, humanhuman

Predictions only

Length 171 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD3DP04234 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD3DP04234 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.06■□□□□ 0.16
CD3DP04234 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD3DP04234 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD3DP04234 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.06■□□□□ 0.16
CD3DP04234 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
CD3DP04234 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD3DP04234 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD3DP04234 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CD3DP04234 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD3DP04234 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CD3DP04234 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
CD3DP04234 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD3DP04234 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
CD3DP04234 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CD3DP04234 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CD3DP04234 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD3DP04234 NXN-202ENST00000537628 1340 ntTSL 3 BASIC16.06■□□□□ 0.16
CD3DP04234 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
CD3DP04234 SERP1-205ENST00000487153 657 ntTSL 4 BASIC16.06■□□□□ 0.16
CD3DP04234 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC16.06■□□□□ 0.16
CD3DP04234 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC16.06■□□□□ 0.16
CD3DP04234 ATXN7-210ENST00000487717 3683 ntAPPRIS P3 TSL 5 BASIC16.06■□□□□ 0.16
CD3DP04234 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
CD3DP04234 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
CD3DP04234 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
CD3DP04234 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC16.06■□□□□ 0.16
CD3DP04234 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
CD3DP04234 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD3DP04234 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD3DP04234 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CD3DP04234 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD3DP04234 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD3DP04234 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD3DP04234 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CD3DP04234 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.05■□□□□ 0.16
CD3DP04234 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC16.05■□□□□ 0.16
CD3DP04234 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CD3DP04234 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD3DP04234 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CD3DP04234 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CD3DP04234 CNN2P6-201ENST00000439038 900 ntBASIC16.05■□□□□ 0.16
CD3DP04234 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.05■□□□□ 0.16
CD3DP04234 SPI1-203ENST00000533030 661 ntTSL 2 BASIC16.05■□□□□ 0.16
CD3DP04234 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC16.05■□□□□ 0.16
CD3DP04234 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD3DP04234 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CD3DP04234 AC005837.3-201ENST00000612163 286 ntBASIC16.05■□□□□ 0.16
CD3DP04234 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
CD3DP04234 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD3DP04234 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC16.05■□□□□ 0.16
CD3DP04234 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
CD3DP04234 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CD3DP04234 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CD3DP04234 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CD3DP04234 C6orf223-203ENST00000442114 3109 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD3DP04234 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC16.05■□□□□ 0.16
CD3DP04234 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD3DP04234 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD3DP04234 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CD3DP04234 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CD3DP04234 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CD3DP04234 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CD3DP04234 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC16.04■□□□□ 0.16
CD3DP04234 LINC00896-202ENST00000609602 2128 ntBASIC16.04■□□□□ 0.16
CD3DP04234 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CD3DP04234 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.04■□□□□ 0.16
CD3DP04234 KRT8P8-201ENST00000434750 1448 ntBASIC16.04■□□□□ 0.16
CD3DP04234 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CD3DP04234 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CD3DP04234 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CD3DP04234 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.04■□□□□ 0.16
CD3DP04234 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CD3DP04234 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CD3DP04234 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CD3DP04234 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CD3DP04234 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC16.04■□□□□ 0.16
CD3DP04234 CLDN3-201ENST00000395145 1274 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CD3DP04234 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CD3DP04234 AC069236.1-201ENST00000604339 616 ntBASIC16.04■□□□□ 0.16
CD3DP04234 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CD3DP04234 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.04■□□□□ 0.16
CD3DP04234 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.04■□□□□ 0.16
CD3DP04234 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CD3DP04234 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CD3DP04234 GOLGA6L3-201ENST00000507199 1679 ntBASIC16.04■□□□□ 0.16
CD3DP04234 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.04■□□□□ 0.16
CD3DP04234 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CD3DP04234 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CD3DP04234 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CD3DP04234 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.04■□□□□ 0.16
CD3DP04234 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
CD3DP04234 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD3DP04234 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC16.03■□□□□ 0.16
CD3DP04234 AC134043.2-201ENST00000624206 2238 ntBASIC16.03■□□□□ 0.16
CD3DP04234 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
CD3DP04234 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CD3DP04234 DTD1-201ENST00000377452 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD3DP04234 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD3DP04234 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms