Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC15□□□□□ -0.01
IFNA1P01562 PYCARD-202ENST00000350605 696 ntTSL 1 (best) BASIC15□□□□□ -0.01
IFNA1P01562 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC15□□□□□ -0.01
IFNA1P01562 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC15□□□□□ -0.01
IFNA1P01562 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
IFNA1P01562 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
IFNA1P01562 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
IFNA1P01562 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
IFNA1P01562 BFSP1-201ENST00000377868 2063 ntTSL 1 (best) BASIC15□□□□□ -0.01
IFNA1P01562 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15□□□□□ -0.01
IFNA1P01562 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
IFNA1P01562 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC15□□□□□ -0.01
IFNA1P01562 MAPK8IP1P2-201ENST00000580257 1472 ntBASIC15□□□□□ -0.01
IFNA1P01562 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
IFNA1P01562 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
IFNA1P01562 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
IFNA1P01562 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
IFNA1P01562 AC063926.3-201ENST00000624734 5658 ntBASIC14.99□□□□□ -0.01
IFNA1P01562 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
IFNA1P01562 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
IFNA1P01562 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
IFNA1P01562 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
IFNA1P01562 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
IFNA1P01562 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
IFNA1P01562 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
IFNA1P01562 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
IFNA1P01562 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC14.99□□□□□ -0.01
IFNA1P01562 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
IFNA1P01562 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC14.99□□□□□ -0.01
IFNA1P01562 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC14.99□□□□□ -0.01
IFNA1P01562 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
IFNA1P01562 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
IFNA1P01562 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC14.99□□□□□ -0.01
IFNA1P01562 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
IFNA1P01562 GRAMD4P2-201ENST00000423297 1097 ntBASIC14.99□□□□□ -0.01
IFNA1P01562 SLC7A5P2-201ENST00000553010 536 ntBASIC14.99□□□□□ -0.01
IFNA1P01562 SRR-208ENST00000576848 588 ntTSL 4 BASIC14.99□□□□□ -0.01
IFNA1P01562 MPST-208ENST00000628507 698 ntTSL 5 BASIC14.99□□□□□ -0.01
IFNA1P01562 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
IFNA1P01562 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
IFNA1P01562 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
IFNA1P01562 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
IFNA1P01562 WAPL-202ENST00000298767 6333 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
IFNA1P01562 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC14.99□□□□□ -0.01
IFNA1P01562 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
IFNA1P01562 RBM17P2-201ENST00000616397 1405 ntBASIC14.99□□□□□ -0.01
IFNA1P01562 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
IFNA1P01562 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC14.99□□□□□ -0.01
IFNA1P01562 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
IFNA1P01562 USP45-201ENST00000327681 6255 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
IFNA1P01562 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
IFNA1P01562 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
IFNA1P01562 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
IFNA1P01562 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
IFNA1P01562 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
IFNA1P01562 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.98□□□□□ -0.01
IFNA1P01562 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC14.98□□□□□ -0.01
IFNA1P01562 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC14.98□□□□□ -0.01
IFNA1P01562 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC14.98□□□□□ -0.01
IFNA1P01562 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
IFNA1P01562 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC14.98□□□□□ -0.01
IFNA1P01562 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC14.98□□□□□ -0.01
IFNA1P01562 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
IFNA1P01562 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC14.98□□□□□ -0.01
IFNA1P01562 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
IFNA1P01562 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
IFNA1P01562 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC14.98□□□□□ -0.01
IFNA1P01562 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
IFNA1P01562 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC14.98□□□□□ -0.01
IFNA1P01562 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
IFNA1P01562 MIR572-201ENST00000384983 95 ntBASIC14.98□□□□□ -0.01
IFNA1P01562 RARRES2P1-201ENST00000474487 481 ntBASIC14.98□□□□□ -0.01
IFNA1P01562 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC14.98□□□□□ -0.01
IFNA1P01562 CCDC92B-201ENST00000575506 885 ntBASIC14.98□□□□□ -0.01
IFNA1P01562 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC14.98□□□□□ -0.01
IFNA1P01562 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
IFNA1P01562 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC14.98□□□□□ -0.01
IFNA1P01562 INTS11-209ENST00000450926 1839 ntTSL 5 BASIC14.98□□□□□ -0.01
IFNA1P01562 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
IFNA1P01562 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
IFNA1P01562 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
IFNA1P01562 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
IFNA1P01562 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
IFNA1P01562 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
IFNA1P01562 LINC00896-202ENST00000609602 2128 ntBASIC14.98□□□□□ -0.01
IFNA1P01562 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC14.98□□□□□ -0.01
IFNA1P01562 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
IFNA1P01562 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
IFNA1P01562 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC14.97□□□□□ -0.01
IFNA1P01562 PSKH1-202ENST00000570631 1509 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
IFNA1P01562 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IFNA1P01562 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
IFNA1P01562 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
IFNA1P01562 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IFNA1P01562 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
IFNA1P01562 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
IFNA1P01562 AC009053.2-201ENST00000563701 2365 ntBASIC14.97□□□□□ -0.01
IFNA1P01562 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
IFNA1P01562 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.97□□□□□ -0.01
IFNA1P01562 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms