Protein–RNA interactions for Protein: O95983

MBD3, Methyl-CpG-binding domain protein 3, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3O95983 AC007773.1-201ENST00000592680 972 ntTSL 2 BASIC21.72■■□□□ 1.07
MBD3O95983 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MBD3O95983 FAM222A-201ENST00000358906 2731 ntAPPRIS P1 TSL 5 BASIC21.72■■□□□ 1.07
MBD3O95983 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MBD3O95983 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MBD3O95983 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MBD3O95983 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC21.72■■□□□ 1.07
MBD3O95983 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
MBD3O95983 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
MBD3O95983 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC21.72■■□□□ 1.07
MBD3O95983 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC21.72■■□□□ 1.07
MBD3O95983 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC21.72■■□□□ 1.07
MBD3O95983 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC21.72■■□□□ 1.07
MBD3O95983 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MBD3O95983 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
MBD3O95983 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MBD3O95983 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MBD3O95983 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC21.71■■□□□ 1.07
MBD3O95983 ZCCHC9-204ENST00000438268 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MBD3O95983 AC005181.1-201ENST00000604782 1256 ntBASIC21.71■■□□□ 1.07
MBD3O95983 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MBD3O95983 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC21.71■■□□□ 1.07
MBD3O95983 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
MBD3O95983 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MBD3O95983 AC124283.5-201ENST00000624661 1809 ntBASIC21.71■■□□□ 1.07
MBD3O95983 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MBD3O95983 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
MBD3O95983 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC21.71■■□□□ 1.07
MBD3O95983 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.07
MBD3O95983 PXK-206ENST00000463280 2825 ntTSL 2 BASIC21.7■■□□□ 1.07
MBD3O95983 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
MBD3O95983 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
MBD3O95983 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
MBD3O95983 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
MBD3O95983 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC21.7■■□□□ 1.06
MBD3O95983 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
MBD3O95983 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC21.7■■□□□ 1.06
MBD3O95983 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
MBD3O95983 AC016769.1-201ENST00000409132 1010 ntBASIC21.7■■□□□ 1.06
MBD3O95983 AC007322.1-201ENST00000426983 750 ntBASIC21.7■■□□□ 1.06
MBD3O95983 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC21.7■■□□□ 1.06
MBD3O95983 TSPY21P-201ENST00000433481 731 ntBASIC21.7■■□□□ 1.06
MBD3O95983 RRAS2-203ENST00000526063 970 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
MBD3O95983 RRAS2-208ENST00000532814 982 ntTSL 1 (best) BASIC21.7■■□□□ 1.06
MBD3O95983 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC21.7■■□□□ 1.06
MBD3O95983 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MBD3O95983 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC21.7■■□□□ 1.06
MBD3O95983 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MBD3O95983 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.7■■□□□ 1.06
MBD3O95983 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC21.7■■□□□ 1.06
MBD3O95983 AC118553.2-202ENST00000638792 2729 ntAPPRIS ALT2 TSL 5 BASIC21.7■■□□□ 1.06
MBD3O95983 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC21.7■■□□□ 1.06
MBD3O95983 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC21.7■■□□□ 1.06
MBD3O95983 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MBD3O95983 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC21.69■■□□□ 1.06
MBD3O95983 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MBD3O95983 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC21.69■■□□□ 1.06
MBD3O95983 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MBD3O95983 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MBD3O95983 GGT1-206ENST00000404223 952 ntTSL 2 BASIC21.69■■□□□ 1.06
MBD3O95983 KRT18P16-201ENST00000510337 1294 ntBASIC21.69■■□□□ 1.06
MBD3O95983 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC21.69■■□□□ 1.06
MBD3O95983 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC21.69■■□□□ 1.06
MBD3O95983 RAP2CP1-201ENST00000605103 478 ntBASIC21.69■■□□□ 1.06
MBD3O95983 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MBD3O95983 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MBD3O95983 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC21.69■■□□□ 1.06
MBD3O95983 DDX17-211ENST00000640332 2190 ntAPPRIS P3 TSL 1 (best) BASIC21.69■■□□□ 1.06
MBD3O95983 DDX17-212ENST00000640668 2196 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
MBD3O95983 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.69■■□□□ 1.06
MBD3O95983 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MBD3O95983 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MBD3O95983 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
MBD3O95983 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC21.69■■□□□ 1.06
MBD3O95983 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC21.69■■□□□ 1.06
MBD3O95983 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.69■■□□□ 1.06
MBD3O95983 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC21.69■■□□□ 1.06
MBD3O95983 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC21.69■■□□□ 1.06
MBD3O95983 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC21.69■■□□□ 1.06
MBD3O95983 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC21.69■■□□□ 1.06
MBD3O95983 GNAS-203ENST00000306120 1878 ntBASIC21.69■■□□□ 1.06
MBD3O95983 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC21.68■■□□□ 1.06
MBD3O95983 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MBD3O95983 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC21.68■■□□□ 1.06
MBD3O95983 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MBD3O95983 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MBD3O95983 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC21.68■■□□□ 1.06
MBD3O95983 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MBD3O95983 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC21.68■■□□□ 1.06
MBD3O95983 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MBD3O95983 RPS2P52-201ENST00000469610 820 ntBASIC21.68■■□□□ 1.06
MBD3O95983 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC21.68■■□□□ 1.06
MBD3O95983 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC21.68■■□□□ 1.06
MBD3O95983 AL121906.2-201ENST00000621597 723 ntBASIC21.68■■□□□ 1.06
MBD3O95983 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MBD3O95983 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC21.68■■□□□ 1.06
MBD3O95983 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC21.68■■□□□ 1.06
MBD3O95983 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC21.68■■□□□ 1.06
MBD3O95983 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
MBD3O95983 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms