Protein–RNA interactions for Protein: O95900

TRUB2, Mitochondrial mRNA pseudouridine synthase TRUB2, humanhuman

Known RBP Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB2O95900 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.85■□□□□ 0.77
TRUB2O95900 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRUB2O95900 SYN2-206ENST00000621198 2674 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRUB2O95900 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRUB2O95900 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC19.84■□□□□ 0.77
TRUB2O95900 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRUB2O95900 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRUB2O95900 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TRUB2O95900 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRUB2O95900 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRUB2O95900 AC087499.1-201ENST00000418141 1075 ntBASIC19.84■□□□□ 0.77
TRUB2O95900 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRUB2O95900 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC19.84■□□□□ 0.77
TRUB2O95900 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC19.84■□□□□ 0.77
TRUB2O95900 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC19.84■□□□□ 0.77
TRUB2O95900 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRUB2O95900 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.84■□□□□ 0.77
TRUB2O95900 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
TRUB2O95900 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRUB2O95900 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
TRUB2O95900 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRUB2O95900 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRUB2O95900 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
TRUB2O95900 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRUB2O95900 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRUB2O95900 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
TRUB2O95900 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRUB2O95900 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRUB2O95900 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRUB2O95900 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRUB2O95900 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRUB2O95900 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRUB2O95900 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC19.83■□□□□ 0.77
TRUB2O95900 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRUB2O95900 AL731557.1-201ENST00000425264 744 ntTSL 3 BASIC19.83■□□□□ 0.77
TRUB2O95900 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC19.83■□□□□ 0.77
TRUB2O95900 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRUB2O95900 CYP2D8P-201ENST00000433633 1490 ntBASIC19.83■□□□□ 0.76
TRUB2O95900 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TRUB2O95900 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRUB2O95900 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC19.83■□□□□ 0.76
TRUB2O95900 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
TRUB2O95900 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.83■□□□□ 0.76
TRUB2O95900 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.83■□□□□ 0.76
TRUB2O95900 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRUB2O95900 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRUB2O95900 AC120498.9-201ENST00000339021 3867 ntBASIC19.82■□□□□ 0.76
TRUB2O95900 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRUB2O95900 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRUB2O95900 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.82■□□□□ 0.76
TRUB2O95900 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.82■□□□□ 0.76
TRUB2O95900 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC19.82■□□□□ 0.76
TRUB2O95900 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.82■□□□□ 0.76
TRUB2O95900 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC19.82■□□□□ 0.76
TRUB2O95900 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC19.82■□□□□ 0.76
TRUB2O95900 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.82■□□□□ 0.76
TRUB2O95900 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC19.82■□□□□ 0.76
TRUB2O95900 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRUB2O95900 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRUB2O95900 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.82■□□□□ 0.76
TRUB2O95900 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRUB2O95900 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRUB2O95900 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
TRUB2O95900 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRUB2O95900 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRUB2O95900 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TRUB2O95900 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRUB2O95900 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRUB2O95900 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.81■□□□□ 0.76
TRUB2O95900 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TRUB2O95900 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRUB2O95900 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.81■□□□□ 0.76
TRUB2O95900 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRUB2O95900 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.81■□□□□ 0.76
TRUB2O95900 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRUB2O95900 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
TRUB2O95900 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRUB2O95900 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRUB2O95900 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.81■□□□□ 0.76
TRUB2O95900 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC19.81■□□□□ 0.76
TRUB2O95900 C2orf69P3-201ENST00000565542 1120 ntBASIC19.81■□□□□ 0.76
TRUB2O95900 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC19.81■□□□□ 0.76
TRUB2O95900 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRUB2O95900 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRUB2O95900 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRUB2O95900 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.81■□□□□ 0.76
TRUB2O95900 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRUB2O95900 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC19.81■□□□□ 0.76
TRUB2O95900 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRUB2O95900 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRUB2O95900 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
TRUB2O95900 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC19.81■□□□□ 0.76
TRUB2O95900 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRUB2O95900 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.81■□□□□ 0.76
TRUB2O95900 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRUB2O95900 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRUB2O95900 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRUB2O95900 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRUB2O95900 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRUB2O95900 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms