Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
NKX2-2O95096 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
NKX2-2O95096 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
NKX2-2O95096 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.48■□□□□ 0.39
NKX2-2O95096 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NKX2-2O95096 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NKX2-2O95096 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NKX2-2O95096 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NKX2-2O95096 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NKX2-2O95096 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
NKX2-2O95096 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NKX2-2O95096 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.48■□□□□ 0.39
NKX2-2O95096 RBM17P1-201ENST00000453646 1190 ntBASIC17.48■□□□□ 0.39
NKX2-2O95096 SNORA78-201ENST00000459373 127 ntBASIC17.48■□□□□ 0.39
NKX2-2O95096 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
NKX2-2O95096 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC17.48■□□□□ 0.39
NKX2-2O95096 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NKX2-2O95096 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
NKX2-2O95096 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
NKX2-2O95096 AL020996.1-203ENST00000536896 2307 ntBASIC17.48■□□□□ 0.39
NKX2-2O95096 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NKX2-2O95096 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
NKX2-2O95096 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NKX2-2O95096 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NKX2-2O95096 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.47■□□□□ 0.39
NKX2-2O95096 KRT17P2-201ENST00000300992 1314 ntBASIC17.47■□□□□ 0.39
NKX2-2O95096 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NKX2-2O95096 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NKX2-2O95096 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NKX2-2O95096 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NKX2-2O95096 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC17.47■□□□□ 0.39
NKX2-2O95096 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.47■□□□□ 0.39
NKX2-2O95096 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.47■□□□□ 0.39
NKX2-2O95096 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
NKX2-2O95096 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
NKX2-2O95096 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NKX2-2O95096 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NKX2-2O95096 UNC93B2-201ENST00000285383 730 ntBASIC17.47■□□□□ 0.39
NKX2-2O95096 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.47■□□□□ 0.39
NKX2-2O95096 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NKX2-2O95096 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
NKX2-2O95096 HDAC11-203ENST00000402271 1018 ntTSL 3 BASIC17.47■□□□□ 0.39
NKX2-2O95096 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NKX2-2O95096 CRYGFP-201ENST00000418459 633 ntBASIC17.47■□□□□ 0.39
NKX2-2O95096 CA15P1-201ENST00000481698 905 ntBASIC17.47■□□□□ 0.39
NKX2-2O95096 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC17.47■□□□□ 0.39
NKX2-2O95096 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.47■□□□□ 0.39
NKX2-2O95096 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.47■□□□□ 0.39
NKX2-2O95096 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NKX2-2O95096 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC17.47■□□□□ 0.39
NKX2-2O95096 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
NKX2-2O95096 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
NKX2-2O95096 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NKX2-2O95096 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.47■□□□□ 0.39
NKX2-2O95096 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC17.47■□□□□ 0.39
NKX2-2O95096 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
NKX2-2O95096 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
NKX2-2O95096 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
NKX2-2O95096 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NKX2-2O95096 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
NKX2-2O95096 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC17.46■□□□□ 0.39
NKX2-2O95096 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.46■□□□□ 0.39
NKX2-2O95096 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NKX2-2O95096 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.46■□□□□ 0.39
NKX2-2O95096 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
NKX2-2O95096 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC17.46■□□□□ 0.39
NKX2-2O95096 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.46■□□□□ 0.39
NKX2-2O95096 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NKX2-2O95096 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC17.46■□□□□ 0.39
NKX2-2O95096 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.46■□□□□ 0.39
NKX2-2O95096 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.46■□□□□ 0.39
NKX2-2O95096 DET1-205ENST00000558413 583 ntTSL 4 BASIC17.46■□□□□ 0.39
NKX2-2O95096 MIR4497-201ENST00000583208 89 ntBASIC17.46■□□□□ 0.39
NKX2-2O95096 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.46■□□□□ 0.39
NKX2-2O95096 TJP1-208ENST00000495972 2890 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
NKX2-2O95096 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
NKX2-2O95096 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC17.46■□□□□ 0.39
NKX2-2O95096 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
NKX2-2O95096 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.46■□□□□ 0.39
NKX2-2O95096 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC17.46■□□□□ 0.39
NKX2-2O95096 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.46■□□□□ 0.39
NKX2-2O95096 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
NKX2-2O95096 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
NKX2-2O95096 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC17.45■□□□□ 0.38
NKX2-2O95096 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
NKX2-2O95096 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC17.45■□□□□ 0.38
NKX2-2O95096 TRIP4-201ENST00000261884 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NKX2-2O95096 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.45■□□□□ 0.38
NKX2-2O95096 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
NKX2-2O95096 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC17.45■□□□□ 0.38
NKX2-2O95096 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.45■□□□□ 0.38
NKX2-2O95096 COBL-210ENST00000632460 1941 ntTSL 5 BASIC17.45■□□□□ 0.38
NKX2-2O95096 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NKX2-2O95096 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
NKX2-2O95096 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
NKX2-2O95096 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC17.45■□□□□ 0.38
NKX2-2O95096 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC17.45■□□□□ 0.38
NKX2-2O95096 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
NKX2-2O95096 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
NKX2-2O95096 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms