Protein–RNA interactions for Protein: O95076

ALX3, Homeobox protein aristaless-like 3, humanhuman

Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALX3O95076 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ALX3O95076 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
ALX3O95076 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ALX3O95076 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.72■□□□□ 0.27
ALX3O95076 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
ALX3O95076 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ALX3O95076 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ALX3O95076 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ALX3O95076 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.72■□□□□ 0.27
ALX3O95076 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC16.72■□□□□ 0.27
ALX3O95076 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ALX3O95076 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC16.72■□□□□ 0.27
ALX3O95076 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC16.72■□□□□ 0.27
ALX3O95076 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC16.72■□□□□ 0.27
ALX3O95076 GNB5-211ENST00000560116 918 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ALX3O95076 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC16.72■□□□□ 0.27
ALX3O95076 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ALX3O95076 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
ALX3O95076 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ALX3O95076 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.72■□□□□ 0.27
ALX3O95076 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ALX3O95076 CEP78-204ENST00000415759 2623 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
ALX3O95076 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC16.72■□□□□ 0.27
ALX3O95076 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
ALX3O95076 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
ALX3O95076 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
ALX3O95076 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ALX3O95076 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
ALX3O95076 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC16.72■□□□□ 0.27
ALX3O95076 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
ALX3O95076 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
ALX3O95076 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
ALX3O95076 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ALX3O95076 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ALX3O95076 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ALX3O95076 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ALX3O95076 ADSL-202ENST00000342312 1808 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
ALX3O95076 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ALX3O95076 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
ALX3O95076 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.71■□□□□ 0.27
ALX3O95076 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC16.71■□□□□ 0.27
ALX3O95076 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC16.71■□□□□ 0.27
ALX3O95076 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC16.71■□□□□ 0.27
ALX3O95076 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
ALX3O95076 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ALX3O95076 AC093827.2-201ENST00000512654 315 ntBASIC16.71■□□□□ 0.27
ALX3O95076 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC16.71■□□□□ 0.27
ALX3O95076 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC16.71■□□□□ 0.27
ALX3O95076 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC16.71■□□□□ 0.27
ALX3O95076 PHB2-213ENST00000546111 858 ntTSL 2 BASIC16.71■□□□□ 0.27
ALX3O95076 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC16.71■□□□□ 0.27
ALX3O95076 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC16.71■□□□□ 0.27
ALX3O95076 AC104771.1-201ENST00000603335 964 ntBASIC16.71■□□□□ 0.27
ALX3O95076 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
ALX3O95076 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ALX3O95076 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC16.71■□□□□ 0.27
ALX3O95076 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
ALX3O95076 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC16.71■□□□□ 0.27
ALX3O95076 SIRPAP1-201ENST00000448467 1770 ntBASIC16.71■□□□□ 0.27
ALX3O95076 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
ALX3O95076 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
ALX3O95076 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC16.71■□□□□ 0.27
ALX3O95076 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.26
ALX3O95076 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
ALX3O95076 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.26
ALX3O95076 AC090164.3-201ENST00000610780 2143 ntBASIC16.7■□□□□ 0.26
ALX3O95076 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC16.7■□□□□ 0.26
ALX3O95076 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC16.7■□□□□ 0.26
ALX3O95076 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ALX3O95076 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC16.7■□□□□ 0.26
ALX3O95076 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ALX3O95076 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC16.7■□□□□ 0.26
ALX3O95076 LCE2A-201ENST00000368779 592 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ALX3O95076 METTL15-202ENST00000403099 795 ntTSL 5 BASIC16.7■□□□□ 0.26
ALX3O95076 MIPEPP3-201ENST00000412105 444 ntBASIC16.7■□□□□ 0.26
ALX3O95076 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
ALX3O95076 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC16.7■□□□□ 0.26
ALX3O95076 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC16.7■□□□□ 0.26
ALX3O95076 AC092118.2-201ENST00000613495 667 ntBASIC16.7■□□□□ 0.26
ALX3O95076 AL772284.2-201ENST00000620151 1147 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
ALX3O95076 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
ALX3O95076 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ALX3O95076 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
ALX3O95076 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.7■□□□□ 0.26
ALX3O95076 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC16.7■□□□□ 0.26
ALX3O95076 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ALX3O95076 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
ALX3O95076 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.7■□□□□ 0.26
ALX3O95076 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.69■□□□□ 0.26
ALX3O95076 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
ALX3O95076 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ALX3O95076 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ALX3O95076 FBXL16-202ENST00000397621 3547 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
ALX3O95076 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC16.69■□□□□ 0.26
ALX3O95076 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC16.69■□□□□ 0.26
ALX3O95076 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC16.69■□□□□ 0.26
ALX3O95076 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
ALX3O95076 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
ALX3O95076 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
ALX3O95076 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms