Protein–RNA interactions for Protein: O60741

HCN1, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 1, humanhuman

Predictions only

Length 890 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCN1O60741 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HCN1O60741 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
HCN1O60741 AL445675.2-201ENST00000620291 557 ntBASIC17.7■□□□□ 0.42
HCN1O60741 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HCN1O60741 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC17.7■□□□□ 0.42
HCN1O60741 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
HCN1O60741 PNCK-201ENST00000340888 1508 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
HCN1O60741 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
HCN1O60741 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HCN1O60741 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
HCN1O60741 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC17.7■□□□□ 0.42
HCN1O60741 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC17.7■□□□□ 0.42
HCN1O60741 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC17.7■□□□□ 0.42
HCN1O60741 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HCN1O60741 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HCN1O60741 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
HCN1O60741 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HCN1O60741 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HCN1O60741 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.7■□□□□ 0.42
HCN1O60741 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HCN1O60741 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HCN1O60741 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.7■□□□□ 0.42
HCN1O60741 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HCN1O60741 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HCN1O60741 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HCN1O60741 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HCN1O60741 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HCN1O60741 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
HCN1O60741 CIDEB-202ENST00000336557 2409 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
HCN1O60741 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.69■□□□□ 0.42
HCN1O60741 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HCN1O60741 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HCN1O60741 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC17.69■□□□□ 0.42
HCN1O60741 BCL2-203ENST00000589955 5011 ntBASIC17.69■□□□□ 0.42
HCN1O60741 MMP23A-201ENST00000234610 1017 ntBASIC17.69■□□□□ 0.42
HCN1O60741 UNC93B2-201ENST00000285383 730 ntBASIC17.69■□□□□ 0.42
HCN1O60741 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HCN1O60741 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
HCN1O60741 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC17.69■□□□□ 0.42
HCN1O60741 AC116562.2-201ENST00000507042 360 ntBASIC17.69■□□□□ 0.42
HCN1O60741 AC026271.3-201ENST00000571884 352 ntBASIC17.69■□□□□ 0.42
HCN1O60741 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HCN1O60741 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HCN1O60741 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.69■□□□□ 0.42
HCN1O60741 AL031985.4-201ENST00000642138 673 ntBASIC17.69■□□□□ 0.42
HCN1O60741 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HCN1O60741 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HCN1O60741 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HCN1O60741 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
HCN1O60741 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HCN1O60741 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC17.69■□□□□ 0.42
HCN1O60741 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
HCN1O60741 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC17.69■□□□□ 0.42
HCN1O60741 PACSIN2-203ENST00000402229 1883 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
HCN1O60741 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HCN1O60741 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC17.69■□□□□ 0.42
HCN1O60741 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HCN1O60741 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HCN1O60741 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
HCN1O60741 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HCN1O60741 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
HCN1O60741 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
HCN1O60741 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HCN1O60741 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HCN1O60741 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HCN1O60741 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HCN1O60741 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC17.68■□□□□ 0.42
HCN1O60741 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.68■□□□□ 0.42
HCN1O60741 IRF3-222ENST00000599144 1117 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HCN1O60741 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.68■□□□□ 0.42
HCN1O60741 REXO1L10P-201ENST00000615707 1290 ntBASIC17.68■□□□□ 0.42
HCN1O60741 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HCN1O60741 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.68■□□□□ 0.42
HCN1O60741 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HCN1O60741 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HCN1O60741 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HCN1O60741 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
HCN1O60741 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HCN1O60741 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HCN1O60741 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HCN1O60741 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HCN1O60741 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC17.68■□□□□ 0.42
HCN1O60741 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
HCN1O60741 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.68■□□□□ 0.42
HCN1O60741 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.67■□□□□ 0.42
HCN1O60741 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HCN1O60741 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HCN1O60741 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HCN1O60741 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HCN1O60741 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC17.67■□□□□ 0.42
HCN1O60741 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.67■□□□□ 0.42
HCN1O60741 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HCN1O60741 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HCN1O60741 PPP1R14BP5-201ENST00000440334 435 ntBASIC17.67■□□□□ 0.42
HCN1O60741 RBM17P1-201ENST00000453646 1190 ntBASIC17.67■□□□□ 0.42
HCN1O60741 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HCN1O60741 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HCN1O60741 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC17.67■□□□□ 0.42
HCN1O60741 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC17.67■□□□□ 0.42
HCN1O60741 AC133561.5-201ENST00000635547 218 ntBASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms