Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
NDUFS4O43181 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NDUFS4O43181 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NDUFS4O43181 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NDUFS4O43181 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC18.14■□□□□ 0.49
NDUFS4O43181 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
NDUFS4O43181 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC18.14■□□□□ 0.49
NDUFS4O43181 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NDUFS4O43181 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NDUFS4O43181 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NDUFS4O43181 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NDUFS4O43181 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NDUFS4O43181 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NDUFS4O43181 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC18.14■□□□□ 0.49
NDUFS4O43181 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC18.14■□□□□ 0.49
NDUFS4O43181 AP005242.2-201ENST00000580065 1175 ntBASIC18.14■□□□□ 0.49
NDUFS4O43181 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NDUFS4O43181 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NDUFS4O43181 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NDUFS4O43181 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NDUFS4O43181 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
NDUFS4O43181 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
NDUFS4O43181 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
NDUFS4O43181 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC18.14■□□□□ 0.49
NDUFS4O43181 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
NDUFS4O43181 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC18.14■□□□□ 0.49
NDUFS4O43181 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC18.13■□□□□ 0.49
NDUFS4O43181 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDUFS4O43181 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDUFS4O43181 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDUFS4O43181 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDUFS4O43181 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NDUFS4O43181 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDUFS4O43181 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC18.13■□□□□ 0.49
NDUFS4O43181 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDUFS4O43181 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDUFS4O43181 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
NDUFS4O43181 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NDUFS4O43181 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
NDUFS4O43181 FITM1-202ENST00000559294 800 ntBASIC18.13■□□□□ 0.49
NDUFS4O43181 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDUFS4O43181 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.13■□□□□ 0.49
NDUFS4O43181 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NDUFS4O43181 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NDUFS4O43181 USP39-202ENST00000409025 1946 ntTSL 5 BASIC18.13■□□□□ 0.49
NDUFS4O43181 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.13■□□□□ 0.49
NDUFS4O43181 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
NDUFS4O43181 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NDUFS4O43181 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC18.13■□□□□ 0.49
NDUFS4O43181 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NDUFS4O43181 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
NDUFS4O43181 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC18.12■□□□□ 0.49
NDUFS4O43181 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDUFS4O43181 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDUFS4O43181 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDUFS4O43181 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC18.12■□□□□ 0.49
NDUFS4O43181 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDUFS4O43181 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDUFS4O43181 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC18.12■□□□□ 0.49
NDUFS4O43181 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NDUFS4O43181 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NDUFS4O43181 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDUFS4O43181 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDUFS4O43181 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDUFS4O43181 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC18.12■□□□□ 0.49
NDUFS4O43181 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDUFS4O43181 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC18.12■□□□□ 0.49
NDUFS4O43181 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDUFS4O43181 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NDUFS4O43181 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NDUFS4O43181 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
NDUFS4O43181 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC18.12■□□□□ 0.49
NDUFS4O43181 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC18.12■□□□□ 0.49
NDUFS4O43181 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDUFS4O43181 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDUFS4O43181 ZIC4-209ENST00000473123 1481 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
NDUFS4O43181 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.12■□□□□ 0.49
NDUFS4O43181 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
NDUFS4O43181 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDUFS4O43181 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NDUFS4O43181 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC18.11■□□□□ 0.49
NDUFS4O43181 AC006333.2-201ENST00000607957 2099 ntBASIC18.11■□□□□ 0.49
NDUFS4O43181 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDUFS4O43181 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NDUFS4O43181 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDUFS4O43181 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
NDUFS4O43181 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC18.11■□□□□ 0.49
NDUFS4O43181 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDUFS4O43181 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDUFS4O43181 ZCCHC24-201ENST00000372333 906 ntTSL 2 BASIC18.11■□□□□ 0.49
NDUFS4O43181 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.11■□□□□ 0.49
NDUFS4O43181 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NDUFS4O43181 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC18.11■□□□□ 0.49
NDUFS4O43181 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NDUFS4O43181 BX088651.1-201ENST00000540551 451 ntBASIC18.11■□□□□ 0.49
NDUFS4O43181 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC18.11■□□□□ 0.49
NDUFS4O43181 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC18.11■□□□□ 0.49
NDUFS4O43181 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NDUFS4O43181 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NDUFS4O43181 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms