Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
RRP8O43159 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC17.77■□□□□ 0.44
RRP8O43159 WDR6-223ENST00000627177 207 ntTSL 2 BASIC17.77■□□□□ 0.44
RRP8O43159 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
RRP8O43159 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC17.77■□□□□ 0.44
RRP8O43159 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
RRP8O43159 WNT10A-201ENST00000258411 2547 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
RRP8O43159 GLT8D1-213ENST00000491606 1577 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
RRP8O43159 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.43
RRP8O43159 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
RRP8O43159 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RRP8O43159 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
RRP8O43159 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC17.76■□□□□ 0.43
RRP8O43159 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC17.76■□□□□ 0.43
RRP8O43159 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RRP8O43159 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RRP8O43159 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RRP8O43159 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RRP8O43159 MRPL3P1-201ENST00000400109 1033 ntBASIC17.76■□□□□ 0.43
RRP8O43159 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC17.76■□□□□ 0.43
RRP8O43159 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC17.76■□□□□ 0.43
RRP8O43159 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
RRP8O43159 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC17.76■□□□□ 0.43
RRP8O43159 AL353801.3-201ENST00000609898 542 ntBASIC17.76■□□□□ 0.43
RRP8O43159 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.76■□□□□ 0.43
RRP8O43159 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC17.76■□□□□ 0.43
RRP8O43159 COL15A1-201ENST00000375001 5496 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RRP8O43159 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RRP8O43159 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RRP8O43159 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RRP8O43159 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RRP8O43159 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RRP8O43159 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC17.76■□□□□ 0.43
RRP8O43159 TBC1D3P2-202ENST00000577902 1649 ntBASIC17.76■□□□□ 0.43
RRP8O43159 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RRP8O43159 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RRP8O43159 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RRP8O43159 HLA-A-201ENST00000376802 1334 ntBASIC17.75■□□□□ 0.43
RRP8O43159 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC17.75■□□□□ 0.43
RRP8O43159 AC007225.1-201ENST00000566331 1836 ntBASIC17.75■□□□□ 0.43
RRP8O43159 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RRP8O43159 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RRP8O43159 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RRP8O43159 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC17.75■□□□□ 0.43
RRP8O43159 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.75■□□□□ 0.43
RRP8O43159 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RRP8O43159 MIR1233-2-201ENST00000408138 82 ntBASIC17.75■□□□□ 0.43
RRP8O43159 MIR1233-1-201ENST00000408722 82 ntBASIC17.75■□□□□ 0.43
RRP8O43159 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RRP8O43159 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RRP8O43159 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RRP8O43159 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RRP8O43159 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RRP8O43159 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RRP8O43159 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RRP8O43159 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RRP8O43159 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.75■□□□□ 0.43
RRP8O43159 AL136038.4-201ENST00000603606 1261 ntBASIC17.75■□□□□ 0.43
RRP8O43159 AC138894.3-201ENST00000603787 634 ntBASIC17.75■□□□□ 0.43
RRP8O43159 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
RRP8O43159 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RRP8O43159 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RRP8O43159 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RRP8O43159 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RRP8O43159 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC17.75■□□□□ 0.43
RRP8O43159 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.75■□□□□ 0.43
RRP8O43159 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RRP8O43159 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RRP8O43159 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RRP8O43159 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.74■□□□□ 0.43
RRP8O43159 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RRP8O43159 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RRP8O43159 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC17.74■□□□□ 0.43
RRP8O43159 AC006128.1-201ENST00000624704 1661 ntBASIC17.74■□□□□ 0.43
RRP8O43159 ADAMTS2-202ENST00000274609 2044 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RRP8O43159 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RRP8O43159 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RRP8O43159 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RRP8O43159 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC17.74■□□□□ 0.43
RRP8O43159 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RRP8O43159 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RRP8O43159 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.74■□□□□ 0.43
RRP8O43159 AC092667.1-201ENST00000434301 2586 ntBASIC17.74■□□□□ 0.43
RRP8O43159 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RRP8O43159 BAALC-202ENST00000306391 243 ntTSL 5 BASIC17.74■□□□□ 0.43
RRP8O43159 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
RRP8O43159 BAALC-204ENST00000330955 222 ntTSL 5 BASIC17.74■□□□□ 0.43
RRP8O43159 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
RRP8O43159 MIR662-201ENST00000384847 95 ntBASIC17.74■□□□□ 0.43
RRP8O43159 HLA-F-220ENST00000434407 884 ntBASIC17.74■□□□□ 0.43
RRP8O43159 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC17.74■□□□□ 0.43
RRP8O43159 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.74■□□□□ 0.43
RRP8O43159 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC17.74■□□□□ 0.43
RRP8O43159 AF228730.7-201ENST00000641842 219 ntBASIC17.74■□□□□ 0.43
RRP8O43159 GLT1D1-204ENST00000442111 2995 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RRP8O43159 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RRP8O43159 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
RRP8O43159 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RRP8O43159 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RRP8O43159 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms