Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC24.1■■□□□ 1.45
ABCC4O15439 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC24.1■■□□□ 1.45
ABCC4O15439 GPX4-207ENST00000589115 812 ntTSL 2 BASIC24.1■■□□□ 1.45
ABCC4O15439 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
ABCC4O15439 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC24.1■■□□□ 1.45
ABCC4O15439 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC24.1■■□□□ 1.45
ABCC4O15439 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
ABCC4O15439 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC24.1■■□□□ 1.45
ABCC4O15439 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
ABCC4O15439 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC24.1■■□□□ 1.45
ABCC4O15439 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC24.1■■□□□ 1.45
ABCC4O15439 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
ABCC4O15439 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC24.1■■□□□ 1.45
ABCC4O15439 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC24.1■■□□□ 1.45
ABCC4O15439 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
ABCC4O15439 UPK3BP1-201ENST00000428678 509 ntBASIC24.1■■□□□ 1.45
ABCC4O15439 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC24.1■■□□□ 1.45
ABCC4O15439 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC24.1■■□□□ 1.45
ABCC4O15439 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
ABCC4O15439 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC24.09■■□□□ 1.45
ABCC4O15439 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC24.09■■□□□ 1.45
ABCC4O15439 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
ABCC4O15439 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
ABCC4O15439 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC24.09■■□□□ 1.45
ABCC4O15439 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
ABCC4O15439 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC24.09■■□□□ 1.45
ABCC4O15439 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC24.09■■□□□ 1.45
ABCC4O15439 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
ABCC4O15439 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
ABCC4O15439 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
ABCC4O15439 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
ABCC4O15439 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
ABCC4O15439 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
ABCC4O15439 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC24.09■■□□□ 1.45
ABCC4O15439 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC24.08■■□□□ 1.45
ABCC4O15439 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
ABCC4O15439 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
ABCC4O15439 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.45
ABCC4O15439 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.44
ABCC4O15439 KCTD18-201ENST00000359878 2940 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
ABCC4O15439 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC24.08■■□□□ 1.44
ABCC4O15439 TSPY5P-201ENST00000426936 936 ntBASIC24.08■■□□□ 1.44
ABCC4O15439 COX11P1-201ENST00000489116 835 ntBASIC24.08■■□□□ 1.44
ABCC4O15439 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC24.08■■□□□ 1.44
ABCC4O15439 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC24.08■■□□□ 1.44
ABCC4O15439 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC24.08■■□□□ 1.44
ABCC4O15439 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC24.08■■□□□ 1.44
ABCC4O15439 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC24.08■■□□□ 1.44
ABCC4O15439 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC24.08■■□□□ 1.44
ABCC4O15439 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC24.08■■□□□ 1.44
ABCC4O15439 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
ABCC4O15439 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC24.07■■□□□ 1.44
ABCC4O15439 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
ABCC4O15439 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
ABCC4O15439 USP39-202ENST00000409025 1946 ntTSL 5 BASIC24.07■■□□□ 1.44
ABCC4O15439 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC24.07■■□□□ 1.44
ABCC4O15439 MED25-212ENST00000618715 1467 ntTSL 5 BASIC24.07■■□□□ 1.44
ABCC4O15439 TNXA-203ENST00000507684 2038 ntBASIC24.07■■□□□ 1.44
ABCC4O15439 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
ABCC4O15439 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
ABCC4O15439 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC24.07■■□□□ 1.44
ABCC4O15439 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC24.07■■□□□ 1.44
ABCC4O15439 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
ABCC4O15439 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
ABCC4O15439 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
ABCC4O15439 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
ABCC4O15439 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC24.07■■□□□ 1.44
ABCC4O15439 NMU-205ENST00000511469 756 ntTSL 3 BASIC24.07■■□□□ 1.44
ABCC4O15439 CLN6-204ENST00000564752 900 ntTSL 3 BASIC24.07■■□□□ 1.44
ABCC4O15439 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC24.07■■□□□ 1.44
ABCC4O15439 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC24.07■■□□□ 1.44
ABCC4O15439 AC091076.1-201ENST00000610741 619 ntBASIC24.07■■□□□ 1.44
ABCC4O15439 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC24.07■■□□□ 1.44
ABCC4O15439 AC141257.4-201ENST00000634557 245 ntBASIC24.07■■□□□ 1.44
ABCC4O15439 AC136944.6-201ENST00000634818 245 ntBASIC24.07■■□□□ 1.44
ABCC4O15439 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
ABCC4O15439 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
ABCC4O15439 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC24.06■■□□□ 1.44
ABCC4O15439 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
ABCC4O15439 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
ABCC4O15439 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC24.06■■□□□ 1.44
ABCC4O15439 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
ABCC4O15439 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC24.06■■□□□ 1.44
ABCC4O15439 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC24.06■■□□□ 1.44
ABCC4O15439 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
ABCC4O15439 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC24.06■■□□□ 1.44
ABCC4O15439 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC24.06■■□□□ 1.44
ABCC4O15439 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC24.06■■□□□ 1.44
ABCC4O15439 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC24.06■■□□□ 1.44
ABCC4O15439 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
ABCC4O15439 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
ABCC4O15439 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC24.06■■□□□ 1.44
ABCC4O15439 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
ABCC4O15439 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC24.06■■□□□ 1.44
ABCC4O15439 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC24.06■■□□□ 1.44
ABCC4O15439 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC24.06■■□□□ 1.44
ABCC4O15439 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC24.06■■□□□ 1.44
ABCC4O15439 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
ABCC4O15439 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
ABCC4O15439 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms