Protein–RNA interactions for Protein: O15379

HDAC3, Histone deacetylase 3, humanhuman

Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3O15379 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HDAC3O15379 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC18.44■□□□□ 0.54
HDAC3O15379 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HDAC3O15379 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC18.44■□□□□ 0.54
HDAC3O15379 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC18.44■□□□□ 0.54
HDAC3O15379 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC18.44■□□□□ 0.54
HDAC3O15379 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HDAC3O15379 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC18.44■□□□□ 0.54
HDAC3O15379 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC18.44■□□□□ 0.54
HDAC3O15379 RARRES2P6-201ENST00000567333 442 ntBASIC18.44■□□□□ 0.54
HDAC3O15379 SUZ12P1-202ENST00000578070 929 ntTSL 5 BASIC18.44■□□□□ 0.54
HDAC3O15379 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC18.44■□□□□ 0.54
HDAC3O15379 ANKRD20A6P-201ENST00000618763 204 ntBASIC18.44■□□□□ 0.54
HDAC3O15379 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
HDAC3O15379 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.44■□□□□ 0.54
HDAC3O15379 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
HDAC3O15379 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
HDAC3O15379 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.44■□□□□ 0.54
HDAC3O15379 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
HDAC3O15379 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.44■□□□□ 0.54
HDAC3O15379 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.44■□□□□ 0.54
HDAC3O15379 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HDAC3O15379 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.43■□□□□ 0.54
HDAC3O15379 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.43■□□□□ 0.54
HDAC3O15379 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HDAC3O15379 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.43■□□□□ 0.54
HDAC3O15379 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.43■□□□□ 0.54
HDAC3O15379 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.43■□□□□ 0.54
HDAC3O15379 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HDAC3O15379 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
HDAC3O15379 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HDAC3O15379 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.43■□□□□ 0.54
HDAC3O15379 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HDAC3O15379 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HDAC3O15379 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.43■□□□□ 0.54
HDAC3O15379 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC18.43■□□□□ 0.54
HDAC3O15379 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC18.43■□□□□ 0.54
HDAC3O15379 REXO2-208ENST00000539754 791 ntTSL 2 BASIC18.43■□□□□ 0.54
HDAC3O15379 HLA-B-256ENST00000639848 1089 ntBASIC18.43■□□□□ 0.54
HDAC3O15379 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HDAC3O15379 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
HDAC3O15379 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
HDAC3O15379 AP000997.3-201ENST00000623333 2250 ntBASIC18.43■□□□□ 0.54
HDAC3O15379 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC18.43■□□□□ 0.54
HDAC3O15379 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HDAC3O15379 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.43■□□□□ 0.54
HDAC3O15379 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.43■□□□□ 0.54
HDAC3O15379 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
HDAC3O15379 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.42■□□□□ 0.54
HDAC3O15379 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HDAC3O15379 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
HDAC3O15379 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HDAC3O15379 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HDAC3O15379 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
HDAC3O15379 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HDAC3O15379 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
HDAC3O15379 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HDAC3O15379 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
HDAC3O15379 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HDAC3O15379 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HDAC3O15379 STYXL1-204ENST00000360591 1127 ntTSL 5 BASIC18.42■□□□□ 0.54
HDAC3O15379 MIR663A-201ENST00000385250 93 ntBASIC18.42■□□□□ 0.54
HDAC3O15379 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
HDAC3O15379 CDCA4P2-201ENST00000441182 718 ntBASIC18.42■□□□□ 0.54
HDAC3O15379 RHOD-202ENST00000532559 538 ntTSL 3 BASIC18.42■□□□□ 0.54
HDAC3O15379 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC18.42■□□□□ 0.54
HDAC3O15379 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HDAC3O15379 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HDAC3O15379 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC18.42■□□□□ 0.54
HDAC3O15379 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HDAC3O15379 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.42■□□□□ 0.54
HDAC3O15379 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HDAC3O15379 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
HDAC3O15379 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
HDAC3O15379 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HDAC3O15379 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HDAC3O15379 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
HDAC3O15379 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC18.42■□□□□ 0.54
HDAC3O15379 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
HDAC3O15379 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC18.42■□□□□ 0.54
HDAC3O15379 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
HDAC3O15379 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
HDAC3O15379 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HDAC3O15379 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HDAC3O15379 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
HDAC3O15379 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC18.41■□□□□ 0.54
HDAC3O15379 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
HDAC3O15379 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.41■□□□□ 0.54
HDAC3O15379 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HDAC3O15379 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.41■□□□□ 0.54
HDAC3O15379 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HDAC3O15379 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.41■□□□□ 0.54
HDAC3O15379 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC18.41■□□□□ 0.54
HDAC3O15379 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC18.41■□□□□ 0.54
HDAC3O15379 AC120498.8-201ENST00000614275 531 ntBASIC18.41■□□□□ 0.54
HDAC3O15379 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
HDAC3O15379 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC18.41■□□□□ 0.54
HDAC3O15379 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.41■□□□□ 0.54
HDAC3O15379 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
HDAC3O15379 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC18.41■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms