Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
AP3B1O00203 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
AP3B1O00203 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
AP3B1O00203 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
AP3B1O00203 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
AP3B1O00203 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
AP3B1O00203 COBL-210ENST00000632460 1941 ntTSL 5 BASIC19.13■□□□□ 0.65
AP3B1O00203 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC19.13■□□□□ 0.65
AP3B1O00203 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.13■□□□□ 0.65
AP3B1O00203 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.13■□□□□ 0.65
AP3B1O00203 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
AP3B1O00203 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
AP3B1O00203 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.13■□□□□ 0.65
AP3B1O00203 RPPH1-201ENST00000516869 333 ntBASIC19.13■□□□□ 0.65
AP3B1O00203 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.13■□□□□ 0.65
AP3B1O00203 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC19.13■□□□□ 0.65
AP3B1O00203 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC19.13■□□□□ 0.65
AP3B1O00203 AC073195.1-201ENST00000607241 877 ntBASIC19.13■□□□□ 0.65
AP3B1O00203 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
AP3B1O00203 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC19.13■□□□□ 0.65
AP3B1O00203 AC079598.2-202ENST00000546624 1451 ntBASIC19.13■□□□□ 0.65
AP3B1O00203 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC19.13■□□□□ 0.65
AP3B1O00203 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC19.13■□□□□ 0.65
AP3B1O00203 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
AP3B1O00203 WNT10B-201ENST00000301061 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
AP3B1O00203 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
AP3B1O00203 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
AP3B1O00203 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
AP3B1O00203 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
AP3B1O00203 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
AP3B1O00203 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.12■□□□□ 0.65
AP3B1O00203 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
AP3B1O00203 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
AP3B1O00203 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.12■□□□□ 0.65
AP3B1O00203 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC19.12■□□□□ 0.65
AP3B1O00203 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
AP3B1O00203 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.12■□□□□ 0.65
AP3B1O00203 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
AP3B1O00203 ANO7L1-203ENST00000602586 1720 ntBASIC19.12■□□□□ 0.65
AP3B1O00203 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
AP3B1O00203 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.12■□□□□ 0.65
AP3B1O00203 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
AP3B1O00203 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
AP3B1O00203 KRT8P3-201ENST00000519669 1449 ntBASIC19.12■□□□□ 0.65
AP3B1O00203 AL135905.2-201ENST00000584934 1404 ntBASIC19.12■□□□□ 0.65
AP3B1O00203 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.12■□□□□ 0.65
AP3B1O00203 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
AP3B1O00203 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.12■□□□□ 0.65
AP3B1O00203 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC19.12■□□□□ 0.65
AP3B1O00203 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.12■□□□□ 0.65
AP3B1O00203 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC19.12■□□□□ 0.65
AP3B1O00203 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC19.12■□□□□ 0.65
AP3B1O00203 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC19.12■□□□□ 0.65
AP3B1O00203 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.12■□□□□ 0.65
AP3B1O00203 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
AP3B1O00203 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
AP3B1O00203 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.12■□□□□ 0.65
AP3B1O00203 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
AP3B1O00203 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
AP3B1O00203 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
AP3B1O00203 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
AP3B1O00203 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
AP3B1O00203 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.11■□□□□ 0.65
AP3B1O00203 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
AP3B1O00203 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP3B1O00203 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP3B1O00203 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP3B1O00203 RCC2P6-201ENST00000526625 1557 ntBASIC19.11■□□□□ 0.65
AP3B1O00203 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
AP3B1O00203 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.11■□□□□ 0.65
AP3B1O00203 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP3B1O00203 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP3B1O00203 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.11■□□□□ 0.65
AP3B1O00203 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
AP3B1O00203 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
AP3B1O00203 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP3B1O00203 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC19.11■□□□□ 0.65
AP3B1O00203 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC19.11■□□□□ 0.65
AP3B1O00203 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
AP3B1O00203 FAM201B-201ENST00000458407 597 ntBASIC19.11■□□□□ 0.65
AP3B1O00203 RPS2P4-201ENST00000476944 856 ntBASIC19.11■□□□□ 0.65
AP3B1O00203 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.11■□□□□ 0.65
AP3B1O00203 FDX2-207ENST00000494368 584 ntTSL 4 BASIC19.11■□□□□ 0.65
AP3B1O00203 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP3B1O00203 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC19.11■□□□□ 0.65
AP3B1O00203 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
AP3B1O00203 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.11■□□□□ 0.65
AP3B1O00203 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
AP3B1O00203 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
AP3B1O00203 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.11■□□□□ 0.65
AP3B1O00203 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC19.11■□□□□ 0.65
AP3B1O00203 HEIH-201ENST00000623091 1652 ntBASIC19.11■□□□□ 0.65
AP3B1O00203 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
AP3B1O00203 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
AP3B1O00203 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC19.1■□□□□ 0.65
AP3B1O00203 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
AP3B1O00203 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.1■□□□□ 0.65
AP3B1O00203 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19.1■□□□□ 0.65
AP3B1O00203 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
AP3B1O00203 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms