Protein–RNA interactions for Protein: A8MV65

VGLL3, Transcription cofactor vestigial-like protein 3, humanhuman

Predictions only

Length 326 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL3A8MV65 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.58■□□□□ 0.57
VGLL3A8MV65 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC18.58■□□□□ 0.56
VGLL3A8MV65 GPRIN1-201ENST00000303991 4211 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VGLL3A8MV65 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
VGLL3A8MV65 SNHG12-212ENST00000531126 719 ntTSL 1 (best) BASIC18.58■□□□□ 0.56
VGLL3A8MV65 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.56
VGLL3A8MV65 MIR6724-1-201ENST00000616420 92 ntBASIC18.58■□□□□ 0.56
VGLL3A8MV65 MIR6724-2-201ENST00000616483 92 ntBASIC18.58■□□□□ 0.56
VGLL3A8MV65 MIR6724-4-201ENST00000617390 92 ntBASIC18.58■□□□□ 0.56
VGLL3A8MV65 MIR6724-3-201ENST00000622482 92 ntBASIC18.58■□□□□ 0.56
VGLL3A8MV65 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC18.58■□□□□ 0.56
VGLL3A8MV65 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
VGLL3A8MV65 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VGLL3A8MV65 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VGLL3A8MV65 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.57■□□□□ 0.56
VGLL3A8MV65 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VGLL3A8MV65 AC114490.1-201ENST00000417456 3163 ntTSL 2 BASIC18.57■□□□□ 0.56
VGLL3A8MV65 PATZ1-204ENST00000405309 3711 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
VGLL3A8MV65 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
VGLL3A8MV65 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC18.57■□□□□ 0.56
VGLL3A8MV65 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
VGLL3A8MV65 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC18.57■□□□□ 0.56
VGLL3A8MV65 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.57■□□□□ 0.56
VGLL3A8MV65 STK32C-205ENST00000456004 607 ntTSL 2 BASIC18.57■□□□□ 0.56
VGLL3A8MV65 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC18.57■□□□□ 0.56
VGLL3A8MV65 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.57■□□□□ 0.56
VGLL3A8MV65 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VGLL3A8MV65 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VGLL3A8MV65 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.57■□□□□ 0.56
VGLL3A8MV65 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VGLL3A8MV65 OXER1-201ENST00000378661 1781 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
VGLL3A8MV65 F11R-206ENST00000621309 4770 ntTSL 5 BASIC18.57■□□□□ 0.56
VGLL3A8MV65 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
VGLL3A8MV65 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.57■□□□□ 0.56
VGLL3A8MV65 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC18.57■□□□□ 0.56
VGLL3A8MV65 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VGLL3A8MV65 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VGLL3A8MV65 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC18.57■□□□□ 0.56
VGLL3A8MV65 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VGLL3A8MV65 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.57■□□□□ 0.56
VGLL3A8MV65 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VGLL3A8MV65 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.57■□□□□ 0.56
VGLL3A8MV65 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC18.57■□□□□ 0.56
VGLL3A8MV65 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
VGLL3A8MV65 OPRK1-205ENST00000612786 5196 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
VGLL3A8MV65 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
VGLL3A8MV65 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.56■□□□□ 0.56
VGLL3A8MV65 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC18.56■□□□□ 0.56
VGLL3A8MV65 AC006333.2-201ENST00000607957 2099 ntBASIC18.56■□□□□ 0.56
VGLL3A8MV65 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
VGLL3A8MV65 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VGLL3A8MV65 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VGLL3A8MV65 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
VGLL3A8MV65 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC18.56■□□□□ 0.56
VGLL3A8MV65 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC18.56■□□□□ 0.56
VGLL3A8MV65 FRMD6-AS1-201ENST00000617151 2229 ntBASIC18.56■□□□□ 0.56
VGLL3A8MV65 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC18.56■□□□□ 0.56
VGLL3A8MV65 ARC-201ENST00000356613 2948 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VGLL3A8MV65 LSM4-201ENST00000252816 986 ntTSL 2 BASIC18.56■□□□□ 0.56
VGLL3A8MV65 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC18.56■□□□□ 0.56
VGLL3A8MV65 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC18.56■□□□□ 0.56
VGLL3A8MV65 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VGLL3A8MV65 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
VGLL3A8MV65 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
VGLL3A8MV65 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.55■□□□□ 0.56
VGLL3A8MV65 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VGLL3A8MV65 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC18.55■□□□□ 0.56
VGLL3A8MV65 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
VGLL3A8MV65 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
VGLL3A8MV65 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC18.55■□□□□ 0.56
VGLL3A8MV65 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
VGLL3A8MV65 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
VGLL3A8MV65 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VGLL3A8MV65 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VGLL3A8MV65 IFNGR1-201ENST00000367739 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VGLL3A8MV65 AHSA2-202ENST00000394457 6574 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
VGLL3A8MV65 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
VGLL3A8MV65 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VGLL3A8MV65 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VGLL3A8MV65 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC18.55■□□□□ 0.56
VGLL3A8MV65 GNAS-203ENST00000306120 1878 ntBASIC18.55■□□□□ 0.56
VGLL3A8MV65 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC18.55■□□□□ 0.56
VGLL3A8MV65 ERRFI1-203ENST00000469499 995 ntTSL 3 BASIC18.55■□□□□ 0.56
VGLL3A8MV65 ARPC4-208ENST00000498623 942 ntTSL 2 BASIC18.55■□□□□ 0.56
VGLL3A8MV65 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VGLL3A8MV65 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VGLL3A8MV65 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC18.55■□□□□ 0.56
VGLL3A8MV65 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VGLL3A8MV65 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
VGLL3A8MV65 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
VGLL3A8MV65 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC18.55■□□□□ 0.56
VGLL3A8MV65 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC18.55■□□□□ 0.56
VGLL3A8MV65 SYBU-235ENST00000533895 3244 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
VGLL3A8MV65 PHTF1-202ENST00000369598 3000 ntTSL 5 BASIC18.55■□□□□ 0.56
VGLL3A8MV65 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
VGLL3A8MV65 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC18.54■□□□□ 0.56
VGLL3A8MV65 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
VGLL3A8MV65 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC18.54■□□□□ 0.56
VGLL3A8MV65 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
VGLL3A8MV65 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC18.54■□□□□ 0.56
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms