Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 AL023284.2-201ENST00000405850 579 ntBASIC19.75■□□□□ 0.75
YJEFN3A6XGL0 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC19.75■□□□□ 0.75
YJEFN3A6XGL0 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
YJEFN3A6XGL0 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
YJEFN3A6XGL0 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
YJEFN3A6XGL0 AC073508.3-201ENST00000619697 1419 ntBASIC19.75■□□□□ 0.75
YJEFN3A6XGL0 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
YJEFN3A6XGL0 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
YJEFN3A6XGL0 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
YJEFN3A6XGL0 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
YJEFN3A6XGL0 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
YJEFN3A6XGL0 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
YJEFN3A6XGL0 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
YJEFN3A6XGL0 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC19.74■□□□□ 0.75
YJEFN3A6XGL0 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
YJEFN3A6XGL0 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.74■□□□□ 0.75
YJEFN3A6XGL0 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
YJEFN3A6XGL0 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC19.74■□□□□ 0.75
YJEFN3A6XGL0 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
YJEFN3A6XGL0 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.74■□□□□ 0.75
YJEFN3A6XGL0 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC19.74■□□□□ 0.75
YJEFN3A6XGL0 KRT8P45-201ENST00000414328 1447 ntBASIC19.74■□□□□ 0.75
YJEFN3A6XGL0 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
YJEFN3A6XGL0 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
YJEFN3A6XGL0 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.74■□□□□ 0.75
YJEFN3A6XGL0 HCG18-235ENST00000426882 4862 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
YJEFN3A6XGL0 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
YJEFN3A6XGL0 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
YJEFN3A6XGL0 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.73■□□□□ 0.75
YJEFN3A6XGL0 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC19.73■□□□□ 0.75
YJEFN3A6XGL0 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC19.73■□□□□ 0.75
YJEFN3A6XGL0 AL137013.1-201ENST00000432946 1228 ntBASIC19.73■□□□□ 0.75
YJEFN3A6XGL0 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC19.73■□□□□ 0.75
YJEFN3A6XGL0 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
YJEFN3A6XGL0 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.73■□□□□ 0.75
YJEFN3A6XGL0 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
YJEFN3A6XGL0 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
YJEFN3A6XGL0 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.73■□□□□ 0.75
YJEFN3A6XGL0 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.73■□□□□ 0.75
YJEFN3A6XGL0 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
YJEFN3A6XGL0 KRT8P32-201ENST00000512863 1461 ntBASIC19.73■□□□□ 0.75
YJEFN3A6XGL0 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.73■□□□□ 0.75
YJEFN3A6XGL0 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
YJEFN3A6XGL0 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
YJEFN3A6XGL0 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC19.72■□□□□ 0.75
YJEFN3A6XGL0 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
YJEFN3A6XGL0 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
YJEFN3A6XGL0 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
YJEFN3A6XGL0 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
YJEFN3A6XGL0 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
YJEFN3A6XGL0 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
YJEFN3A6XGL0 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.72■□□□□ 0.75
YJEFN3A6XGL0 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
YJEFN3A6XGL0 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
YJEFN3A6XGL0 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.72■□□□□ 0.75
YJEFN3A6XGL0 KRT18P57-201ENST00000443599 1254 ntBASIC19.72■□□□□ 0.75
YJEFN3A6XGL0 KRT18P21-201ENST00000515767 1272 ntBASIC19.72■□□□□ 0.75
YJEFN3A6XGL0 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
YJEFN3A6XGL0 LRRC4B-201ENST00000389201 2958 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
YJEFN3A6XGL0 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC19.72■□□□□ 0.75
YJEFN3A6XGL0 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.72■□□□□ 0.75
YJEFN3A6XGL0 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.72■□□□□ 0.75
YJEFN3A6XGL0 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
YJEFN3A6XGL0 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.72■□□□□ 0.75
YJEFN3A6XGL0 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
YJEFN3A6XGL0 RCC2P3-201ENST00000418112 1537 ntBASIC19.71■□□□□ 0.75
YJEFN3A6XGL0 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
YJEFN3A6XGL0 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC19.71■□□□□ 0.75
YJEFN3A6XGL0 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
YJEFN3A6XGL0 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
YJEFN3A6XGL0 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
YJEFN3A6XGL0 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
YJEFN3A6XGL0 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
YJEFN3A6XGL0 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.71■□□□□ 0.75
YJEFN3A6XGL0 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
YJEFN3A6XGL0 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
YJEFN3A6XGL0 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
YJEFN3A6XGL0 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
YJEFN3A6XGL0 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
YJEFN3A6XGL0 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
YJEFN3A6XGL0 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
YJEFN3A6XGL0 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
YJEFN3A6XGL0 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC19.71■□□□□ 0.75
YJEFN3A6XGL0 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
YJEFN3A6XGL0 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
YJEFN3A6XGL0 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC19.71■□□□□ 0.75
YJEFN3A6XGL0 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
YJEFN3A6XGL0 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.71■□□□□ 0.75
YJEFN3A6XGL0 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
YJEFN3A6XGL0 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC19.71■□□□□ 0.75
YJEFN3A6XGL0 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC19.71■□□□□ 0.75
YJEFN3A6XGL0 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
YJEFN3A6XGL0 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC19.71■□□□□ 0.75
YJEFN3A6XGL0 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.71■□□□□ 0.75
YJEFN3A6XGL0 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
YJEFN3A6XGL0 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
YJEFN3A6XGL0 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
YJEFN3A6XGL0 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
YJEFN3A6XGL0 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
YJEFN3A6XGL0 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC19.7■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms