Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC22.03■■□□□ 1.12
TMEM88BA6NKF7 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC22.03■■□□□ 1.12
TMEM88BA6NKF7 AC040169.1-201ENST00000565382 521 ntBASIC22.03■■□□□ 1.12
TMEM88BA6NKF7 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TMEM88BA6NKF7 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TMEM88BA6NKF7 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC22.03■■□□□ 1.12
TMEM88BA6NKF7 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC22.03■■□□□ 1.12
TMEM88BA6NKF7 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TMEM88BA6NKF7 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
TMEM88BA6NKF7 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
TMEM88BA6NKF7 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
TMEM88BA6NKF7 GOLGA2P11-201ENST00000562660 1621 ntBASIC22.02■■□□□ 1.12
TMEM88BA6NKF7 EPS8L1-202ENST00000245618 2198 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
TMEM88BA6NKF7 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC22.02■■□□□ 1.12
TMEM88BA6NKF7 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TMEM88BA6NKF7 AFG3L1P-210ENST00000431757 569 ntTSL 4 BASIC22.02■■□□□ 1.12
TMEM88BA6NKF7 KRT18P3-201ENST00000451602 1288 ntBASIC22.02■■□□□ 1.12
TMEM88BA6NKF7 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC22.02■■□□□ 1.12
TMEM88BA6NKF7 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC22.02■■□□□ 1.12
TMEM88BA6NKF7 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC22.02■■□□□ 1.12
TMEM88BA6NKF7 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
TMEM88BA6NKF7 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC22.02■■□□□ 1.12
TMEM88BA6NKF7 KRT18P28-201ENST00000453838 1332 ntBASIC22.02■■□□□ 1.12
TMEM88BA6NKF7 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC22.02■■□□□ 1.12
TMEM88BA6NKF7 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
TMEM88BA6NKF7 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
TMEM88BA6NKF7 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
TMEM88BA6NKF7 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC22.02■■□□□ 1.11
TMEM88BA6NKF7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
TMEM88BA6NKF7 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC22.02■■□□□ 1.11
TMEM88BA6NKF7 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
TMEM88BA6NKF7 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC22.02■■□□□ 1.11
TMEM88BA6NKF7 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.11
TMEM88BA6NKF7 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.11
TMEM88BA6NKF7 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TMEM88BA6NKF7 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC22.01■■□□□ 1.11
TMEM88BA6NKF7 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TMEM88BA6NKF7 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC22.01■■□□□ 1.11
TMEM88BA6NKF7 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
TMEM88BA6NKF7 KRT8P7-201ENST00000533003 1432 ntBASIC22.01■■□□□ 1.11
TMEM88BA6NKF7 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
TMEM88BA6NKF7 AL135791.1-201ENST00000429214 826 ntTSL 5 BASIC22.01■■□□□ 1.11
TMEM88BA6NKF7 FGFR3P6-201ENST00000457012 610 ntBASIC22.01■■□□□ 1.11
TMEM88BA6NKF7 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC22.01■■□□□ 1.11
TMEM88BA6NKF7 AC034105.1-201ENST00000563488 319 ntBASIC22.01■■□□□ 1.11
TMEM88BA6NKF7 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC22.01■■□□□ 1.11
TMEM88BA6NKF7 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
TMEM88BA6NKF7 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC22.01■■□□□ 1.11
TMEM88BA6NKF7 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
TMEM88BA6NKF7 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TMEM88BA6NKF7 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TMEM88BA6NKF7 FBXW11-203ENST00000393802 2181 ntTSL 1 (best) BASIC22■■□□□ 1.11
TMEM88BA6NKF7 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TMEM88BA6NKF7 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC22■■□□□ 1.11
TMEM88BA6NKF7 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
TMEM88BA6NKF7 AC027117.2-201ENST00000522768 510 ntTSL 3 BASIC22■■□□□ 1.11
TMEM88BA6NKF7 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC22■■□□□ 1.11
TMEM88BA6NKF7 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC22■■□□□ 1.11
TMEM88BA6NKF7 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC22■■□□□ 1.11
TMEM88BA6NKF7 AC092364.2-202ENST00000597012 1073 ntBASIC22■■□□□ 1.11
TMEM88BA6NKF7 AC114341.1-201ENST00000618070 349 ntBASIC22■■□□□ 1.11
TMEM88BA6NKF7 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC22■■□□□ 1.11
TMEM88BA6NKF7 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC22■■□□□ 1.11
TMEM88BA6NKF7 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
TMEM88BA6NKF7 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC22■■□□□ 1.11
TMEM88BA6NKF7 MAZ-201ENST00000219782 2698 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
TMEM88BA6NKF7 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC21.99■■□□□ 1.11
TMEM88BA6NKF7 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TMEM88BA6NKF7 FBXW4P1-201ENST00000426721 2239 ntBASIC21.99■■□□□ 1.11
TMEM88BA6NKF7 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TMEM88BA6NKF7 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
TMEM88BA6NKF7 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
TMEM88BA6NKF7 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
TMEM88BA6NKF7 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC21.99■■□□□ 1.11
TMEM88BA6NKF7 CYMP-203ENST00000474680 1263 ntBASIC21.99■■□□□ 1.11
TMEM88BA6NKF7 AC096582.2-201ENST00000510860 516 ntBASIC21.99■■□□□ 1.11
TMEM88BA6NKF7 TEN1-204ENST00000588202 862 ntTSL 3 BASIC21.99■■□□□ 1.11
TMEM88BA6NKF7 AC239800.4-201ENST00000603712 296 ntBASIC21.99■■□□□ 1.11
TMEM88BA6NKF7 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
TMEM88BA6NKF7 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC21.99■■□□□ 1.11
TMEM88BA6NKF7 TTLL7-214ENST00000610996 2028 ntTSL 5 BASIC21.99■■□□□ 1.11
TMEM88BA6NKF7 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC21.99■■□□□ 1.11
TMEM88BA6NKF7 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.99■■□□□ 1.11
TMEM88BA6NKF7 PBK-203ENST00000522944 1499 ntTSL 2 BASIC21.98■■□□□ 1.11
TMEM88BA6NKF7 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TMEM88BA6NKF7 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TMEM88BA6NKF7 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TMEM88BA6NKF7 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
TMEM88BA6NKF7 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TMEM88BA6NKF7 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC21.98■■□□□ 1.11
TMEM88BA6NKF7 PMP22-202ENST00000395936 816 ntTSL 3 BASIC21.98■■□□□ 1.11
TMEM88BA6NKF7 THAP5-204ENST00000438865 868 ntTSL 2 BASIC21.98■■□□□ 1.11
TMEM88BA6NKF7 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
TMEM88BA6NKF7 PPOX-214ENST00000535223 664 ntTSL 3 BASIC21.98■■□□□ 1.11
TMEM88BA6NKF7 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC21.98■■□□□ 1.11
TMEM88BA6NKF7 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TMEM88BA6NKF7 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
TMEM88BA6NKF7 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
TMEM88BA6NKF7 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC21.97■■□□□ 1.11
TMEM88BA6NKF7 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms