Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TBC1D3FA6NER0 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC18.86■□□□□ 0.61
TBC1D3FA6NER0 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC18.86■□□□□ 0.61
TBC1D3FA6NER0 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
TBC1D3FA6NER0 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
TBC1D3FA6NER0 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC18.86■□□□□ 0.61
TBC1D3FA6NER0 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
TBC1D3FA6NER0 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TBC1D3FA6NER0 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC18.86■□□□□ 0.61
TBC1D3FA6NER0 AC125437.2-201ENST00000625180 2167 ntBASIC18.86■□□□□ 0.61
TBC1D3FA6NER0 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TBC1D3FA6NER0 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
TBC1D3FA6NER0 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC18.86■□□□□ 0.61
TBC1D3FA6NER0 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
TBC1D3FA6NER0 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC18.85■□□□□ 0.61
TBC1D3FA6NER0 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TBC1D3FA6NER0 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TBC1D3FA6NER0 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TBC1D3FA6NER0 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TBC1D3FA6NER0 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TBC1D3FA6NER0 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TBC1D3FA6NER0 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC18.85■□□□□ 0.61
TBC1D3FA6NER0 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TBC1D3FA6NER0 FYN-204ENST00000368678 2573 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
TBC1D3FA6NER0 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TBC1D3FA6NER0 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TBC1D3FA6NER0 ILF2-202ENST00000368681 726 ntTSL 2 BASIC18.85■□□□□ 0.61
TBC1D3FA6NER0 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TBC1D3FA6NER0 AL023284.2-201ENST00000405850 579 ntBASIC18.85■□□□□ 0.61
TBC1D3FA6NER0 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC18.85■□□□□ 0.61
TBC1D3FA6NER0 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
TBC1D3FA6NER0 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC18.85■□□□□ 0.61
TBC1D3FA6NER0 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TBC1D3FA6NER0 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
TBC1D3FA6NER0 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TBC1D3FA6NER0 SSBP3-216ENST00000610401 3168 ntTSL 5 BASIC18.85■□□□□ 0.61
TBC1D3FA6NER0 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.85■□□□□ 0.61
TBC1D3FA6NER0 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC18.85■□□□□ 0.61
TBC1D3FA6NER0 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC18.85■□□□□ 0.61
TBC1D3FA6NER0 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TBC1D3FA6NER0 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
TBC1D3FA6NER0 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.85■□□□□ 0.61
TBC1D3FA6NER0 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TBC1D3FA6NER0 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TBC1D3FA6NER0 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TBC1D3FA6NER0 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TBC1D3FA6NER0 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC18.85■□□□□ 0.61
TBC1D3FA6NER0 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.85■□□□□ 0.61
TBC1D3FA6NER0 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TBC1D3FA6NER0 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC18.84■□□□□ 0.61
TBC1D3FA6NER0 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TBC1D3FA6NER0 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC18.84■□□□□ 0.61
TBC1D3FA6NER0 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TBC1D3FA6NER0 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
TBC1D3FA6NER0 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TBC1D3FA6NER0 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TBC1D3FA6NER0 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TBC1D3FA6NER0 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TBC1D3FA6NER0 COPS8-203ENST00000409334 794 ntTSL 5 BASIC18.84■□□□□ 0.61
TBC1D3FA6NER0 MCCD1P1-208ENST00000445732 328 ntBASIC18.84■□□□□ 0.61
TBC1D3FA6NER0 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.84■□□□□ 0.61
TBC1D3FA6NER0 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC18.84■□□□□ 0.61
TBC1D3FA6NER0 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC18.84■□□□□ 0.61
TBC1D3FA6NER0 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC18.84■□□□□ 0.61
TBC1D3FA6NER0 USF2-205ENST00000594064 1179 ntTSL 2 BASIC18.84■□□□□ 0.61
TBC1D3FA6NER0 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.84■□□□□ 0.61
TBC1D3FA6NER0 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC18.84■□□□□ 0.61
TBC1D3FA6NER0 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TBC1D3FA6NER0 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TBC1D3FA6NER0 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TBC1D3FA6NER0 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC18.84■□□□□ 0.61
TBC1D3FA6NER0 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TBC1D3FA6NER0 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.84■□□□□ 0.61
TBC1D3FA6NER0 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TBC1D3FA6NER0 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TBC1D3FA6NER0 AC036111.1-201ENST00000533973 1582 ntBASIC18.84■□□□□ 0.61
TBC1D3FA6NER0 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TBC1D3FA6NER0 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC18.84■□□□□ 0.61
TBC1D3FA6NER0 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TBC1D3FA6NER0 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TBC1D3FA6NER0 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TBC1D3FA6NER0 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TBC1D3FA6NER0 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
TBC1D3FA6NER0 KRT8P3-201ENST00000519669 1449 ntBASIC18.83■□□□□ 0.61
TBC1D3FA6NER0 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC18.83■□□□□ 0.61
TBC1D3FA6NER0 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TBC1D3FA6NER0 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC18.83■□□□□ 0.61
TBC1D3FA6NER0 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TBC1D3FA6NER0 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC18.83■□□□□ 0.61
TBC1D3FA6NER0 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TBC1D3FA6NER0 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TBC1D3FA6NER0 DMKN-208ENST00000424570 1293 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
TBC1D3FA6NER0 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC18.83■□□□□ 0.6
TBC1D3FA6NER0 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TBC1D3FA6NER0 VENTXP5-201ENST00000523979 775 ntBASIC18.83■□□□□ 0.6
TBC1D3FA6NER0 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC18.83■□□□□ 0.6
TBC1D3FA6NER0 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
TBC1D3FA6NER0 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TBC1D3FA6NER0 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC18.83■□□□□ 0.6
TBC1D3FA6NER0 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms