Protein–RNA interactions for Protein: A4D1U4

LCHN, Protein LCHN, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCHNA4D1U4 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
LCHNA4D1U4 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LCHNA4D1U4 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.3■□□□□ 0.84
LCHNA4D1U4 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
LCHNA4D1U4 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LCHNA4D1U4 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LCHNA4D1U4 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LCHNA4D1U4 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
LCHNA4D1U4 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.3■□□□□ 0.84
LCHNA4D1U4 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
LCHNA4D1U4 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
LCHNA4D1U4 AC106795.1-205ENST00000512851 1056 ntBASIC20.3■□□□□ 0.84
LCHNA4D1U4 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC20.3■□□□□ 0.84
LCHNA4D1U4 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC20.3■□□□□ 0.84
LCHNA4D1U4 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC20.3■□□□□ 0.84
LCHNA4D1U4 AL671883.3-201ENST00000603274 991 ntBASIC20.3■□□□□ 0.84
LCHNA4D1U4 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.3■□□□□ 0.84
LCHNA4D1U4 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LCHNA4D1U4 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC20.3■□□□□ 0.84
LCHNA4D1U4 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
LCHNA4D1U4 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC20.29■□□□□ 0.84
LCHNA4D1U4 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC20.29■□□□□ 0.84
LCHNA4D1U4 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.29■□□□□ 0.84
LCHNA4D1U4 AL512408.1-201ENST00000569378 2000 ntBASIC20.29■□□□□ 0.84
LCHNA4D1U4 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LCHNA4D1U4 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LCHNA4D1U4 AC092667.1-201ENST00000434301 2586 ntBASIC20.29■□□□□ 0.84
LCHNA4D1U4 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LCHNA4D1U4 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
LCHNA4D1U4 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LCHNA4D1U4 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC20.29■□□□□ 0.84
LCHNA4D1U4 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LCHNA4D1U4 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LCHNA4D1U4 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LCHNA4D1U4 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LCHNA4D1U4 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LCHNA4D1U4 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC20.29■□□□□ 0.84
LCHNA4D1U4 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LCHNA4D1U4 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC20.29■□□□□ 0.84
LCHNA4D1U4 AC012615.1-201ENST00000565797 1299 ntBASIC20.29■□□□□ 0.84
LCHNA4D1U4 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
LCHNA4D1U4 MIR3180-5-201ENST00000583743 153 ntBASIC20.29■□□□□ 0.84
LCHNA4D1U4 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LCHNA4D1U4 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LCHNA4D1U4 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
LCHNA4D1U4 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
LCHNA4D1U4 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
LCHNA4D1U4 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
LCHNA4D1U4 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
LCHNA4D1U4 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC20.29■□□□□ 0.84
LCHNA4D1U4 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC20.28■□□□□ 0.84
LCHNA4D1U4 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
LCHNA4D1U4 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
LCHNA4D1U4 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LCHNA4D1U4 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LCHNA4D1U4 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC20.28■□□□□ 0.84
LCHNA4D1U4 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.28■□□□□ 0.84
LCHNA4D1U4 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
LCHNA4D1U4 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LCHNA4D1U4 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
LCHNA4D1U4 GRAMD4P1-201ENST00000435181 1110 ntBASIC20.28■□□□□ 0.84
LCHNA4D1U4 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC20.28■□□□□ 0.84
LCHNA4D1U4 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC20.28■□□□□ 0.84
LCHNA4D1U4 MIR3917-201ENST00000580971 93 ntBASIC20.28■□□□□ 0.84
LCHNA4D1U4 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.28■□□□□ 0.84
LCHNA4D1U4 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC20.28■□□□□ 0.84
LCHNA4D1U4 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LCHNA4D1U4 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.28■□□□□ 0.84
LCHNA4D1U4 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
LCHNA4D1U4 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
LCHNA4D1U4 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LCHNA4D1U4 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC20.27■□□□□ 0.84
LCHNA4D1U4 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.27■□□□□ 0.84
LCHNA4D1U4 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.27■□□□□ 0.84
LCHNA4D1U4 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LCHNA4D1U4 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
LCHNA4D1U4 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC20.27■□□□□ 0.84
LCHNA4D1U4 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LCHNA4D1U4 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.27■□□□□ 0.84
LCHNA4D1U4 C1orf43-204ENST00000368518 1278 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LCHNA4D1U4 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
LCHNA4D1U4 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC20.27■□□□□ 0.84
LCHNA4D1U4 MCCD1P1-208ENST00000445732 328 ntBASIC20.27■□□□□ 0.84
LCHNA4D1U4 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.27■□□□□ 0.84
LCHNA4D1U4 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC20.27■□□□□ 0.84
LCHNA4D1U4 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.27■□□□□ 0.84
LCHNA4D1U4 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC20.27■□□□□ 0.84
LCHNA4D1U4 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC20.27■□□□□ 0.84
LCHNA4D1U4 CALM3-211ENST00000598871 561 ntTSL 4 BASIC20.27■□□□□ 0.84
LCHNA4D1U4 AC138894.3-201ENST00000603787 634 ntBASIC20.27■□□□□ 0.84
LCHNA4D1U4 MED17-221ENST00000639724 2317 ntTSL 5 BASIC20.27■□□□□ 0.84
LCHNA4D1U4 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
LCHNA4D1U4 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
LCHNA4D1U4 SDHAP1-207ENST00000440850 2000 ntBASIC20.27■□□□□ 0.84
LCHNA4D1U4 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC20.27■□□□□ 0.84
LCHNA4D1U4 PABPC4-204ENST00000372862 2470 ntTSL 5 BASIC20.27■□□□□ 0.83
LCHNA4D1U4 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
LCHNA4D1U4 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
LCHNA4D1U4 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.26■□□□□ 0.83
LCHNA4D1U4 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms