Protein–RNA interactions for Protein: A2VCL2

CCDC162P, Coiled-coil domain-containing protein 162, humanhuman

Predictions only

Length 907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC162PA2VCL2 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.95■□□□□ 0.62
CCDC162PA2VCL2 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC162PA2VCL2 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCDC162PA2VCL2 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC162PA2VCL2 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CCDC162PA2VCL2 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC18.94■□□□□ 0.62
CCDC162PA2VCL2 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC162PA2VCL2 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC162PA2VCL2 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC162PA2VCL2 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC162PA2VCL2 MDFI-202ENST00000373050 809 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC162PA2VCL2 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CCDC162PA2VCL2 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC18.94■□□□□ 0.62
CCDC162PA2VCL2 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC18.94■□□□□ 0.62
CCDC162PA2VCL2 AC008550.1-201ENST00000511500 884 ntBASIC18.94■□□□□ 0.62
CCDC162PA2VCL2 NUDT16P1-203ENST00000513809 620 ntBASIC18.94■□□□□ 0.62
CCDC162PA2VCL2 PENK-204ENST00000518770 863 ntTSL 2 BASIC18.94■□□□□ 0.62
CCDC162PA2VCL2 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC18.94■□□□□ 0.62
CCDC162PA2VCL2 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC18.94■□□□□ 0.62
CCDC162PA2VCL2 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC18.94■□□□□ 0.62
CCDC162PA2VCL2 AP001412.1-201ENST00000608405 714 ntBASIC18.94■□□□□ 0.62
CCDC162PA2VCL2 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC162PA2VCL2 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.94■□□□□ 0.62
CCDC162PA2VCL2 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC162PA2VCL2 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC18.94■□□□□ 0.62
CCDC162PA2VCL2 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC162PA2VCL2 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC162PA2VCL2 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.94■□□□□ 0.62
CCDC162PA2VCL2 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CCDC162PA2VCL2 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC162PA2VCL2 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC162PA2VCL2 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC162PA2VCL2 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CCDC162PA2VCL2 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCDC162PA2VCL2 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC18.93■□□□□ 0.62
CCDC162PA2VCL2 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC18.93■□□□□ 0.62
CCDC162PA2VCL2 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC162PA2VCL2 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC162PA2VCL2 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.93■□□□□ 0.62
CCDC162PA2VCL2 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.93■□□□□ 0.62
CCDC162PA2VCL2 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC162PA2VCL2 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC162PA2VCL2 CCDC74B-203ENST00000409128 789 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CCDC162PA2VCL2 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC162PA2VCL2 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.93■□□□□ 0.62
CCDC162PA2VCL2 TMEM263-203ENST00000547242 811 ntAPPRIS P1 TSL 2 BASIC18.93■□□□□ 0.62
CCDC162PA2VCL2 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.93■□□□□ 0.62
CCDC162PA2VCL2 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC18.93■□□□□ 0.62
CCDC162PA2VCL2 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC162PA2VCL2 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC162PA2VCL2 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.93■□□□□ 0.62
CCDC162PA2VCL2 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC162PA2VCL2 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
CCDC162PA2VCL2 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC162PA2VCL2 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC18.93■□□□□ 0.62
CCDC162PA2VCL2 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.93■□□□□ 0.62
CCDC162PA2VCL2 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCDC162PA2VCL2 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.93■□□□□ 0.62
CCDC162PA2VCL2 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC162PA2VCL2 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC162PA2VCL2 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC162PA2VCL2 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC162PA2VCL2 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC162PA2VCL2 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC162PA2VCL2 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC162PA2VCL2 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC162PA2VCL2 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC162PA2VCL2 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC162PA2VCL2 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC162PA2VCL2 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC162PA2VCL2 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC162PA2VCL2 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.92■□□□□ 0.62
CCDC162PA2VCL2 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC18.92■□□□□ 0.62
CCDC162PA2VCL2 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC162PA2VCL2 AC116562.2-201ENST00000507042 360 ntBASIC18.92■□□□□ 0.62
CCDC162PA2VCL2 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC162PA2VCL2 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC162PA2VCL2 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC18.92■□□□□ 0.62
CCDC162PA2VCL2 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC18.92■□□□□ 0.62
CCDC162PA2VCL2 CKBP1-201ENST00000565489 1086 ntBASIC18.92■□□□□ 0.62
CCDC162PA2VCL2 AP000692.2-201ENST00000608391 879 ntBASIC18.92■□□□□ 0.62
CCDC162PA2VCL2 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC162PA2VCL2 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC162PA2VCL2 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC162PA2VCL2 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC162PA2VCL2 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC162PA2VCL2 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CCDC162PA2VCL2 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC162PA2VCL2 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC18.92■□□□□ 0.62
CCDC162PA2VCL2 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC18.92■□□□□ 0.62
CCDC162PA2VCL2 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC18.92■□□□□ 0.62
CCDC162PA2VCL2 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC162PA2VCL2 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC162PA2VCL2 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC162PA2VCL2 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.91■□□□□ 0.62
CCDC162PA2VCL2 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.91■□□□□ 0.62
CCDC162PA2VCL2 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.91■□□□□ 0.62
CCDC162PA2VCL2 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC18.91■□□□□ 0.62
CCDC162PA2VCL2 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.91■□□□□ 0.62
CCDC162PA2VCL2 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 44.8 ms