Protein–RNA interactions for Protein: A0A1B0GTZ2

CCDC196, Putative coiled-coil domain-containing protein 196, humanhuman

Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC196A0A1B0GTZ2 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CCDC196A0A1B0GTZ2 CXADR-204ENST00000400166 1080 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CCDC196A0A1B0GTZ2 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC22.04■■□□□ 1.12
CCDC196A0A1B0GTZ2 FITM1-202ENST00000559294 800 ntBASIC22.04■■□□□ 1.12
CCDC196A0A1B0GTZ2 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC22.04■■□□□ 1.12
CCDC196A0A1B0GTZ2 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CCDC196A0A1B0GTZ2 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
CCDC196A0A1B0GTZ2 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC22.04■■□□□ 1.12
CCDC196A0A1B0GTZ2 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC22.04■■□□□ 1.12
CCDC196A0A1B0GTZ2 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
CCDC196A0A1B0GTZ2 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC22.04■■□□□ 1.12
CCDC196A0A1B0GTZ2 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CCDC196A0A1B0GTZ2 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCDC196A0A1B0GTZ2 AC079598.2-202ENST00000546624 1451 ntBASIC22.03■■□□□ 1.12
CCDC196A0A1B0GTZ2 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC22.03■■□□□ 1.12
CCDC196A0A1B0GTZ2 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCDC196A0A1B0GTZ2 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCDC196A0A1B0GTZ2 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC22.03■■□□□ 1.12
CCDC196A0A1B0GTZ2 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCDC196A0A1B0GTZ2 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CCDC196A0A1B0GTZ2 AL596275.1-201ENST00000423464 877 ntBASIC22.03■■□□□ 1.12
CCDC196A0A1B0GTZ2 FDX2-206ENST00000492239 773 ntTSL 2 BASIC22.03■■□□□ 1.12
CCDC196A0A1B0GTZ2 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CCDC196A0A1B0GTZ2 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC22.03■■□□□ 1.12
CCDC196A0A1B0GTZ2 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC22.03■■□□□ 1.12
CCDC196A0A1B0GTZ2 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CCDC196A0A1B0GTZ2 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCDC196A0A1B0GTZ2 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCDC196A0A1B0GTZ2 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC22.03■■□□□ 1.12
CCDC196A0A1B0GTZ2 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCDC196A0A1B0GTZ2 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCDC196A0A1B0GTZ2 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
CCDC196A0A1B0GTZ2 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC22.03■■□□□ 1.12
CCDC196A0A1B0GTZ2 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC22.02■■□□□ 1.12
CCDC196A0A1B0GTZ2 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC22.02■■□□□ 1.12
CCDC196A0A1B0GTZ2 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CCDC196A0A1B0GTZ2 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC22.02■■□□□ 1.12
CCDC196A0A1B0GTZ2 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
CCDC196A0A1B0GTZ2 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
CCDC196A0A1B0GTZ2 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC22.02■■□□□ 1.12
CCDC196A0A1B0GTZ2 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
CCDC196A0A1B0GTZ2 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
CCDC196A0A1B0GTZ2 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CCDC196A0A1B0GTZ2 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC22.02■■□□□ 1.12
CCDC196A0A1B0GTZ2 AP000525.1-201ENST00000608286 694 ntBASIC22.02■■□□□ 1.12
CCDC196A0A1B0GTZ2 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC22.02■■□□□ 1.12
CCDC196A0A1B0GTZ2 AC083906.6-201ENST00000641366 219 ntBASIC22.02■■□□□ 1.12
CCDC196A0A1B0GTZ2 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CCDC196A0A1B0GTZ2 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC22.02■■□□□ 1.12
CCDC196A0A1B0GTZ2 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
CCDC196A0A1B0GTZ2 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.12
CCDC196A0A1B0GTZ2 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
CCDC196A0A1B0GTZ2 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC22.02■■□□□ 1.12
CCDC196A0A1B0GTZ2 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
CCDC196A0A1B0GTZ2 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC22.02■■□□□ 1.11
CCDC196A0A1B0GTZ2 AC087289.5-201ENST00000586076 3175 ntBASIC22.01■■□□□ 1.11
CCDC196A0A1B0GTZ2 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
CCDC196A0A1B0GTZ2 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC22.01■■□□□ 1.11
CCDC196A0A1B0GTZ2 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC22.01■■□□□ 1.11
CCDC196A0A1B0GTZ2 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CCDC196A0A1B0GTZ2 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC22.01■■□□□ 1.11
CCDC196A0A1B0GTZ2 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC22.01■■□□□ 1.11
CCDC196A0A1B0GTZ2 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC22.01■■□□□ 1.11
CCDC196A0A1B0GTZ2 TSTD1-202ENST00000368023 574 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
CCDC196A0A1B0GTZ2 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC22.01■■□□□ 1.11
CCDC196A0A1B0GTZ2 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
CCDC196A0A1B0GTZ2 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
CCDC196A0A1B0GTZ2 TNXA-203ENST00000507684 2038 ntBASIC22.01■■□□□ 1.11
CCDC196A0A1B0GTZ2 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
CCDC196A0A1B0GTZ2 RIMKLB-202ENST00000357529 5830 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
CCDC196A0A1B0GTZ2 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CCDC196A0A1B0GTZ2 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
CCDC196A0A1B0GTZ2 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC22■■□□□ 1.11
CCDC196A0A1B0GTZ2 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
CCDC196A0A1B0GTZ2 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
CCDC196A0A1B0GTZ2 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC22■■□□□ 1.11
CCDC196A0A1B0GTZ2 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC22■■□□□ 1.11
CCDC196A0A1B0GTZ2 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC22■■□□□ 1.11
CCDC196A0A1B0GTZ2 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC22■■□□□ 1.11
CCDC196A0A1B0GTZ2 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC22■■□□□ 1.11
CCDC196A0A1B0GTZ2 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC22■■□□□ 1.11
CCDC196A0A1B0GTZ2 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC22■■□□□ 1.11
CCDC196A0A1B0GTZ2 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC22■■□□□ 1.11
CCDC196A0A1B0GTZ2 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC22■■□□□ 1.11
CCDC196A0A1B0GTZ2 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CCDC196A0A1B0GTZ2 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
CCDC196A0A1B0GTZ2 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CCDC196A0A1B0GTZ2 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CCDC196A0A1B0GTZ2 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CCDC196A0A1B0GTZ2 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC21.99■■□□□ 1.11
CCDC196A0A1B0GTZ2 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC21.99■■□□□ 1.11
CCDC196A0A1B0GTZ2 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CCDC196A0A1B0GTZ2 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CCDC196A0A1B0GTZ2 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
CCDC196A0A1B0GTZ2 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CCDC196A0A1B0GTZ2 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CCDC196A0A1B0GTZ2 MIR1238-201ENST00000408483 83 ntBASIC21.99■■□□□ 1.11
CCDC196A0A1B0GTZ2 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CCDC196A0A1B0GTZ2 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC21.99■■□□□ 1.11
CCDC196A0A1B0GTZ2 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC21.99■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms