Protein–RNA interactions for Protein: A0A0K0K1C4

TRBV27, T-cell receptor beta variable 27 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV27A0A0K0K1C4 TUBB8P6-201ENST00000436895 1288 ntBASIC13.4□□□□□ -0.26
TRBV27A0A0K0K1C4 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
TRBV27A0A0K0K1C4 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
TRBV27A0A0K0K1C4 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC13.4□□□□□ -0.26
TRBV27A0A0K0K1C4 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC13.4□□□□□ -0.26
TRBV27A0A0K0K1C4 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC13.4□□□□□ -0.26
TRBV27A0A0K0K1C4 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV27A0A0K0K1C4 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV27A0A0K0K1C4 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC13.4□□□□□ -0.26
TRBV27A0A0K0K1C4 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV27A0A0K0K1C4 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV27A0A0K0K1C4 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
TRBV27A0A0K0K1C4 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV27A0A0K0K1C4 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV27A0A0K0K1C4 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
TRBV27A0A0K0K1C4 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC13.4□□□□□ -0.26
TRBV27A0A0K0K1C4 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
TRBV27A0A0K0K1C4 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC13.4□□□□□ -0.26
TRBV27A0A0K0K1C4 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
TRBV27A0A0K0K1C4 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV27A0A0K0K1C4 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC13.39□□□□□ -0.27
TRBV27A0A0K0K1C4 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC13.39□□□□□ -0.27
TRBV27A0A0K0K1C4 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC13.39□□□□□ -0.27
TRBV27A0A0K0K1C4 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV27A0A0K0K1C4 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV27A0A0K0K1C4 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV27A0A0K0K1C4 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV27A0A0K0K1C4 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV27A0A0K0K1C4 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC13.39□□□□□ -0.27
TRBV27A0A0K0K1C4 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV27A0A0K0K1C4 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
TRBV27A0A0K0K1C4 SOCS1-201ENST00000332029 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV27A0A0K0K1C4 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC13.39□□□□□ -0.27
TRBV27A0A0K0K1C4 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
TRBV27A0A0K0K1C4 SERPINH1P1-201ENST00000419794 1249 ntBASIC13.39□□□□□ -0.27
TRBV27A0A0K0K1C4 KRT18P5-201ENST00000436075 1291 ntBASIC13.39□□□□□ -0.27
TRBV27A0A0K0K1C4 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC13.39□□□□□ -0.27
TRBV27A0A0K0K1C4 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC13.39□□□□□ -0.27
TRBV27A0A0K0K1C4 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC13.39□□□□□ -0.27
TRBV27A0A0K0K1C4 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC13.39□□□□□ -0.27
TRBV27A0A0K0K1C4 PLD4-205ENST00000553861 667 ntTSL 2 BASIC13.39□□□□□ -0.27
TRBV27A0A0K0K1C4 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
TRBV27A0A0K0K1C4 DCAKD-205ENST00000588499 990 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
TRBV27A0A0K0K1C4 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC13.39□□□□□ -0.27
TRBV27A0A0K0K1C4 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC13.39□□□□□ -0.27
TRBV27A0A0K0K1C4 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV27A0A0K0K1C4 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC13.39□□□□□ -0.27
TRBV27A0A0K0K1C4 SNAI3-AS1-205ENST00000568633 2096 ntBASIC13.39□□□□□ -0.27
TRBV27A0A0K0K1C4 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC13.39□□□□□ -0.27
TRBV27A0A0K0K1C4 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC13.39□□□□□ -0.27
TRBV27A0A0K0K1C4 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV27A0A0K0K1C4 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV27A0A0K0K1C4 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV27A0A0K0K1C4 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV27A0A0K0K1C4 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV27A0A0K0K1C4 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV27A0A0K0K1C4 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV27A0A0K0K1C4 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
TRBV27A0A0K0K1C4 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
TRBV27A0A0K0K1C4 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV27A0A0K0K1C4 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV27A0A0K0K1C4 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV27A0A0K0K1C4 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV27A0A0K0K1C4 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV27A0A0K0K1C4 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV27A0A0K0K1C4 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV27A0A0K0K1C4 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV27A0A0K0K1C4 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC13.38□□□□□ -0.27
TRBV27A0A0K0K1C4 GAS2L1P1-201ENST00000420145 1480 ntBASIC13.38□□□□□ -0.27
TRBV27A0A0K0K1C4 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC13.38□□□□□ -0.27
TRBV27A0A0K0K1C4 CD276-203ENST00000537340 2439 ntTSL 2 BASIC13.38□□□□□ -0.27
TRBV27A0A0K0K1C4 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV27A0A0K0K1C4 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV27A0A0K0K1C4 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV27A0A0K0K1C4 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC13.38□□□□□ -0.27
TRBV27A0A0K0K1C4 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV27A0A0K0K1C4 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV27A0A0K0K1C4 PYCR3-202ENST00000377579 985 ntTSL 2 BASIC13.38□□□□□ -0.27
TRBV27A0A0K0K1C4 TNFRSF18-203ENST00000379268 1179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV27A0A0K0K1C4 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC13.38□□□□□ -0.27
TRBV27A0A0K0K1C4 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
TRBV27A0A0K0K1C4 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TRBV27A0A0K0K1C4 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC13.38□□□□□ -0.27
TRBV27A0A0K0K1C4 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC13.38□□□□□ -0.27
TRBV27A0A0K0K1C4 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC13.38□□□□□ -0.27
TRBV27A0A0K0K1C4 MAZ-216ENST00000616501 991 ntTSL 5 BASIC13.38□□□□□ -0.27
TRBV27A0A0K0K1C4 MIR6821-201ENST00000617625 74 ntBASIC13.38□□□□□ -0.27
TRBV27A0A0K0K1C4 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC13.38□□□□□ -0.27
TRBV27A0A0K0K1C4 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV27A0A0K0K1C4 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV27A0A0K0K1C4 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC13.38□□□□□ -0.27
TRBV27A0A0K0K1C4 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TRBV27A0A0K0K1C4 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV27A0A0K0K1C4 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
TRBV27A0A0K0K1C4 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC13.38□□□□□ -0.27
TRBV27A0A0K0K1C4 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV27A0A0K0K1C4 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV27A0A0K0K1C4 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV27A0A0K0K1C4 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
TRBV27A0A0K0K1C4 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms