Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 BX640515.1-201ENST00000617215 977 ntBASIC18.74■□□□□ 0.59
CCDC163A0A0D9SF12 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC163A0A0D9SF12 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC163A0A0D9SF12 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC163A0A0D9SF12 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC163A0A0D9SF12 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
CCDC163A0A0D9SF12 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC163A0A0D9SF12 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC163A0A0D9SF12 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC163A0A0D9SF12 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC163A0A0D9SF12 AL162377.1-201ENST00000618844 1793 ntBASIC18.73■□□□□ 0.59
CCDC163A0A0D9SF12 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC163A0A0D9SF12 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC163A0A0D9SF12 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC163A0A0D9SF12 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC163A0A0D9SF12 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC163A0A0D9SF12 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC163A0A0D9SF12 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC163A0A0D9SF12 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC163A0A0D9SF12 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC163A0A0D9SF12 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC18.73■□□□□ 0.59
CCDC163A0A0D9SF12 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC163A0A0D9SF12 ORAOV1-210ENST00000539414 817 ntAPPRIS ALT1 TSL 2 BASIC18.73■□□□□ 0.59
CCDC163A0A0D9SF12 AC005332.3-201ENST00000589904 676 ntBASIC18.73■□□□□ 0.59
CCDC163A0A0D9SF12 AL390719.2-201ENST00000606993 987 ntBASIC18.73■□□□□ 0.59
CCDC163A0A0D9SF12 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC18.73■□□□□ 0.59
CCDC163A0A0D9SF12 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC163A0A0D9SF12 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.73■□□□□ 0.59
CCDC163A0A0D9SF12 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC163A0A0D9SF12 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC163A0A0D9SF12 PRKCD-202ENST00000394729 2810 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
CCDC163A0A0D9SF12 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.73■□□□□ 0.59
CCDC163A0A0D9SF12 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC163A0A0D9SF12 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
CCDC163A0A0D9SF12 RTN1-202ENST00000342503 1703 ntAPPRIS ALT1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC163A0A0D9SF12 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC163A0A0D9SF12 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC163A0A0D9SF12 AC233702.3-201ENST00000578656 1387 ntBASIC18.72■□□□□ 0.59
CCDC163A0A0D9SF12 DFFB-203ENST00000341385 572 ntTSL 5 BASIC18.72■□□□□ 0.59
CCDC163A0A0D9SF12 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC163A0A0D9SF12 TEX30-205ENST00000376029 959 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC163A0A0D9SF12 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC163A0A0D9SF12 AP003733.1-201ENST00000491725 852 ntBASIC18.72■□□□□ 0.59
CCDC163A0A0D9SF12 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC163A0A0D9SF12 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC18.72■□□□□ 0.59
CCDC163A0A0D9SF12 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.72■□□□□ 0.59
CCDC163A0A0D9SF12 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC163A0A0D9SF12 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC163A0A0D9SF12 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC163A0A0D9SF12 AC084125.4-201ENST00000580385 338 ntTSL 3 BASIC18.72■□□□□ 0.59
CCDC163A0A0D9SF12 MIR3180-4-201ENST00000582223 153 ntBASIC18.72■□□□□ 0.59
CCDC163A0A0D9SF12 AC010240.3-201ENST00000607688 395 ntBASIC18.72■□□□□ 0.59
CCDC163A0A0D9SF12 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC163A0A0D9SF12 IGHV3-41-201ENST00000613121 348 ntBASIC18.72■□□□□ 0.59
CCDC163A0A0D9SF12 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.72■□□□□ 0.59
CCDC163A0A0D9SF12 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC18.72■□□□□ 0.59
CCDC163A0A0D9SF12 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC163A0A0D9SF12 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC163A0A0D9SF12 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC18.72■□□□□ 0.59
CCDC163A0A0D9SF12 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.72■□□□□ 0.59
CCDC163A0A0D9SF12 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC163A0A0D9SF12 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC163A0A0D9SF12 SDHAP1-207ENST00000440850 2000 ntBASIC18.71■□□□□ 0.59
CCDC163A0A0D9SF12 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC163A0A0D9SF12 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC163A0A0D9SF12 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC163A0A0D9SF12 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC163A0A0D9SF12 MYO1D-213ENST00000583621 1916 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC163A0A0D9SF12 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC163A0A0D9SF12 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC163A0A0D9SF12 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.71■□□□□ 0.59
CCDC163A0A0D9SF12 KRT16P4-201ENST00000453883 522 ntBASIC18.71■□□□□ 0.59
CCDC163A0A0D9SF12 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC163A0A0D9SF12 AC074051.2-201ENST00000565115 352 ntBASIC18.71■□□□□ 0.59
CCDC163A0A0D9SF12 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC163A0A0D9SF12 AC064862.7-201ENST00000604520 867 ntBASIC18.71■□□□□ 0.59
CCDC163A0A0D9SF12 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC163A0A0D9SF12 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC18.71■□□□□ 0.59
CCDC163A0A0D9SF12 ZNF852-201ENST00000436261 1968 ntAPPRIS P1 TSL 2 BASIC18.71■□□□□ 0.59
CCDC163A0A0D9SF12 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC18.71■□□□□ 0.59
CCDC163A0A0D9SF12 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
CCDC163A0A0D9SF12 UBC-206ENST00000538617 1303 ntTSL 5 BASIC18.71■□□□□ 0.59
CCDC163A0A0D9SF12 AL512408.1-201ENST00000569378 2000 ntBASIC18.71■□□□□ 0.59
CCDC163A0A0D9SF12 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC163A0A0D9SF12 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC163A0A0D9SF12 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC163A0A0D9SF12 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC18.7■□□□□ 0.58
CCDC163A0A0D9SF12 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC163A0A0D9SF12 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC163A0A0D9SF12 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC163A0A0D9SF12 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC163A0A0D9SF12 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC163A0A0D9SF12 KRT18P23-201ENST00000435622 1283 ntBASIC18.7■□□□□ 0.58
CCDC163A0A0D9SF12 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
CCDC163A0A0D9SF12 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC163A0A0D9SF12 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC18.7■□□□□ 0.58
CCDC163A0A0D9SF12 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC18.7■□□□□ 0.58
CCDC163A0A0D9SF12 ZNF668-207ENST00000535577 2396 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
CCDC163A0A0D9SF12 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
CCDC163A0A0D9SF12 HLA-A-201ENST00000376802 1334 ntBASIC18.7■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 37.9 ms