Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC13.19□□□□□ -0.3
TRBV6-8A0A0A6YYG3 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV6-8A0A0A6YYG3 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV6-8A0A0A6YYG3 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
TRBV6-8A0A0A6YYG3 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC13.19□□□□□ -0.3
TRBV6-8A0A0A6YYG3 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV6-8A0A0A6YYG3 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC13.19□□□□□ -0.3
TRBV6-8A0A0A6YYG3 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC13.19□□□□□ -0.3
TRBV6-8A0A0A6YYG3 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
TRBV6-8A0A0A6YYG3 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV6-8A0A0A6YYG3 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC13.19□□□□□ -0.3
TRBV6-8A0A0A6YYG3 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV6-8A0A0A6YYG3 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV6-8A0A0A6YYG3 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
TRBV6-8A0A0A6YYG3 CDCA7L-203ENST00000406877 3066 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV6-8A0A0A6YYG3 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV6-8A0A0A6YYG3 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV6-8A0A0A6YYG3 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV6-8A0A0A6YYG3 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV6-8A0A0A6YYG3 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
TRBV6-8A0A0A6YYG3 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV6-8A0A0A6YYG3 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV6-8A0A0A6YYG3 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
TRBV6-8A0A0A6YYG3 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV6-8A0A0A6YYG3 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV6-8A0A0A6YYG3 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV6-8A0A0A6YYG3 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV6-8A0A0A6YYG3 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
TRBV6-8A0A0A6YYG3 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
TRBV6-8A0A0A6YYG3 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV6-8A0A0A6YYG3 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV6-8A0A0A6YYG3 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
TRBV6-8A0A0A6YYG3 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC13.19□□□□□ -0.3
TRBV6-8A0A0A6YYG3 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
TRBV6-8A0A0A6YYG3 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC13.19□□□□□ -0.3
TRBV6-8A0A0A6YYG3 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-8A0A0A6YYG3 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-8A0A0A6YYG3 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-8A0A0A6YYG3 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
TRBV6-8A0A0A6YYG3 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC13.18□□□□□ -0.3
TRBV6-8A0A0A6YYG3 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC13.18□□□□□ -0.3
TRBV6-8A0A0A6YYG3 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-8A0A0A6YYG3 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC13.18□□□□□ -0.3
TRBV6-8A0A0A6YYG3 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-8A0A0A6YYG3 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-8A0A0A6YYG3 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-8A0A0A6YYG3 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-8A0A0A6YYG3 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-8A0A0A6YYG3 AC133681.1-201ENST00000465482 601 ntBASIC13.18□□□□□ -0.3
TRBV6-8A0A0A6YYG3 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC13.18□□□□□ -0.3
TRBV6-8A0A0A6YYG3 GLRB-205ENST00000512619 728 ntTSL 3 BASIC13.18□□□□□ -0.3
TRBV6-8A0A0A6YYG3 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC13.18□□□□□ -0.3
TRBV6-8A0A0A6YYG3 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC13.18□□□□□ -0.3
TRBV6-8A0A0A6YYG3 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC13.18□□□□□ -0.3
TRBV6-8A0A0A6YYG3 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC13.18□□□□□ -0.3
TRBV6-8A0A0A6YYG3 AC110285.5-201ENST00000611501 352 ntBASIC13.18□□□□□ -0.3
TRBV6-8A0A0A6YYG3 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC13.18□□□□□ -0.3
TRBV6-8A0A0A6YYG3 MTFP1-206ENST00000629597 482 ntTSL 5 BASIC13.18□□□□□ -0.3
TRBV6-8A0A0A6YYG3 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-8A0A0A6YYG3 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
TRBV6-8A0A0A6YYG3 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
TRBV6-8A0A0A6YYG3 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC13.18□□□□□ -0.3
TRBV6-8A0A0A6YYG3 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-8A0A0A6YYG3 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-8A0A0A6YYG3 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-8A0A0A6YYG3 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-8A0A0A6YYG3 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC13.18□□□□□ -0.3
TRBV6-8A0A0A6YYG3 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-8A0A0A6YYG3 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-8A0A0A6YYG3 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-8A0A0A6YYG3 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-8A0A0A6YYG3 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
TRBV6-8A0A0A6YYG3 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
TRBV6-8A0A0A6YYG3 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-8A0A0A6YYG3 TMEM79-203ENST00000405535 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-8A0A0A6YYG3 TSGA10IP-203ENST00000532620 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-8A0A0A6YYG3 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-8A0A0A6YYG3 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-8A0A0A6YYG3 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-8A0A0A6YYG3 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC13.17□□□□□ -0.3
TRBV6-8A0A0A6YYG3 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-8A0A0A6YYG3 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-8A0A0A6YYG3 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC13.17□□□□□ -0.3
TRBV6-8A0A0A6YYG3 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
TRBV6-8A0A0A6YYG3 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-8A0A0A6YYG3 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
TRBV6-8A0A0A6YYG3 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-8A0A0A6YYG3 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC13.17□□□□□ -0.3
TRBV6-8A0A0A6YYG3 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
TRBV6-8A0A0A6YYG3 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-8A0A0A6YYG3 WIZP1-201ENST00000531444 2299 ntBASIC13.17□□□□□ -0.3
TRBV6-8A0A0A6YYG3 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC13.17□□□□□ -0.3
TRBV6-8A0A0A6YYG3 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-8A0A0A6YYG3 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-8A0A0A6YYG3 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-8A0A0A6YYG3 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC13.17□□□□□ -0.3
TRBV6-8A0A0A6YYG3 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
TRBV6-8A0A0A6YYG3 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-8A0A0A6YYG3 THAP6-213ENST00000514480 1161 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
TRBV6-8A0A0A6YYG3 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC13.17□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms