Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TRAV30A0A087WSZ9 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC14.89□□□□□ -0.03
TRAV30A0A087WSZ9 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV30A0A087WSZ9 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV30A0A087WSZ9 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV30A0A087WSZ9 SKOR1-203ENST00000554054 3620 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
TRAV30A0A087WSZ9 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV30A0A087WSZ9 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
TRAV30A0A087WSZ9 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV30A0A087WSZ9 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV30A0A087WSZ9 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV30A0A087WSZ9 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV30A0A087WSZ9 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC14.89□□□□□ -0.03
TRAV30A0A087WSZ9 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV30A0A087WSZ9 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV30A0A087WSZ9 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
TRAV30A0A087WSZ9 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV30A0A087WSZ9 CA3-AS1-201ENST00000517697 559 ntTSL 4 BASIC14.89□□□□□ -0.03
TRAV30A0A087WSZ9 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV30A0A087WSZ9 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC14.89□□□□□ -0.03
TRAV30A0A087WSZ9 KLF2-202ENST00000592003 564 ntTSL 3 BASIC14.89□□□□□ -0.03
TRAV30A0A087WSZ9 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC14.89□□□□□ -0.03
TRAV30A0A087WSZ9 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV30A0A087WSZ9 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC14.89□□□□□ -0.03
TRAV30A0A087WSZ9 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV30A0A087WSZ9 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV30A0A087WSZ9 AC093525.10-201ENST00000625130 1569 ntBASIC14.89□□□□□ -0.03
TRAV30A0A087WSZ9 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV30A0A087WSZ9 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV30A0A087WSZ9 ESPN-202ENST00000416731 1338 ntTSL 5 BASIC14.89□□□□□ -0.03
TRAV30A0A087WSZ9 AL049812.1-201ENST00000432563 2267 ntBASIC14.89□□□□□ -0.03
TRAV30A0A087WSZ9 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
TRAV30A0A087WSZ9 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV30A0A087WSZ9 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
TRAV30A0A087WSZ9 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC14.89□□□□□ -0.03
TRAV30A0A087WSZ9 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV30A0A087WSZ9 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TRAV30A0A087WSZ9 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV30A0A087WSZ9 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV30A0A087WSZ9 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAV30A0A087WSZ9 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC14.88□□□□□ -0.03
TRAV30A0A087WSZ9 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV30A0A087WSZ9 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV30A0A087WSZ9 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV30A0A087WSZ9 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV30A0A087WSZ9 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV30A0A087WSZ9 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV30A0A087WSZ9 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC14.88□□□□□ -0.03
TRAV30A0A087WSZ9 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV30A0A087WSZ9 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV30A0A087WSZ9 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV30A0A087WSZ9 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC14.88□□□□□ -0.03
TRAV30A0A087WSZ9 AC068831.2-201ENST00000448987 367 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAV30A0A087WSZ9 THEM4-205ENST00000489410 643 ntTSL 2 BASIC14.88□□□□□ -0.03
TRAV30A0A087WSZ9 EXOSC4-202ENST00000525936 606 ntTSL 3 BASIC14.88□□□□□ -0.03
TRAV30A0A087WSZ9 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TRAV30A0A087WSZ9 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC14.88□□□□□ -0.03
TRAV30A0A087WSZ9 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV30A0A087WSZ9 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC14.88□□□□□ -0.03
TRAV30A0A087WSZ9 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV30A0A087WSZ9 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV30A0A087WSZ9 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV30A0A087WSZ9 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV30A0A087WSZ9 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
TRAV30A0A087WSZ9 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV30A0A087WSZ9 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV30A0A087WSZ9 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV30A0A087WSZ9 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV30A0A087WSZ9 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
TRAV30A0A087WSZ9 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV30A0A087WSZ9 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC14.88□□□□□ -0.03
TRAV30A0A087WSZ9 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV30A0A087WSZ9 CACNA2D2-201ENST00000266039 5476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV30A0A087WSZ9 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
TRAV30A0A087WSZ9 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV30A0A087WSZ9 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV30A0A087WSZ9 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV30A0A087WSZ9 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
TRAV30A0A087WSZ9 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV30A0A087WSZ9 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV30A0A087WSZ9 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV30A0A087WSZ9 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC14.87□□□□□ -0.03
TRAV30A0A087WSZ9 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV30A0A087WSZ9 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV30A0A087WSZ9 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV30A0A087WSZ9 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV30A0A087WSZ9 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
TRAV30A0A087WSZ9 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV30A0A087WSZ9 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV30A0A087WSZ9 AC106820.2-201ENST00000563775 3264 ntBASIC14.87□□□□□ -0.03
TRAV30A0A087WSZ9 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV30A0A087WSZ9 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV30A0A087WSZ9 ANXA2-201ENST00000332680 1444 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV30A0A087WSZ9 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC14.87□□□□□ -0.03
TRAV30A0A087WSZ9 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV30A0A087WSZ9 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC14.87□□□□□ -0.03
TRAV30A0A087WSZ9 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV30A0A087WSZ9 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV30A0A087WSZ9 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
TRAV30A0A087WSZ9 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 48.3 ms