Protein–RNA interactions for Protein: Q9BYR3

KRTAP4-4, Keratin-associated protein 4-4, humanhuman

Predictions only

Length 166 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-4Q9BYR3 AC020891.2-201ENST00000559672 776 ntTSL 2 BASIC1.19□□□□□ -2.22
KRTAP4-4Q9BYR3 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC1.19□□□□□ -2.22
KRTAP4-4Q9BYR3 RN7SL366P-201ENST00000577957 292 ntBASIC1.19□□□□□ -2.22
KRTAP4-4Q9BYR3 SNORD39.2-201ENST00000579995 76 ntBASIC1.19□□□□□ -2.22
KRTAP4-4Q9BYR3 AC126915.2-201ENST00000610957 190 ntBASIC1.19□□□□□ -2.22
KRTAP4-4Q9BYR3 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
KRTAP4-4Q9BYR3 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC1.19□□□□□ -2.22
KRTAP4-4Q9BYR3 ADAM29-213ENST00000615367 3386 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
KRTAP4-4Q9BYR3 MIR6778-201ENST00000617912 73 ntBASIC1.19□□□□□ -2.22
KRTAP4-4Q9BYR3 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC1.19□□□□□ -2.22
KRTAP4-4Q9BYR3 Z97988.1-201ENST00000637697 135 ntBASIC1.19□□□□□ -2.22
KRTAP4-4Q9BYR3 MIR4426-201ENST00000640330 63 ntBASIC1.19□□□□□ -2.22
KRTAP4-4Q9BYR3 KCNC4-201ENST00000369787 18750 ntAPPRIS P3 TSL 1 (best) BASIC1.19□□□□□ -2.22
KRTAP4-4Q9BYR3 DOCK11-201ENST00000276202 6625 ntAPPRIS P2 TSL 1 (best) BASIC1.19□□□□□ -2.22
KRTAP4-4Q9BYR3 FNDC3A-202ENST00000398316 5714 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
KRTAP4-4Q9BYR3 CNOT1-202ENST00000441024 4999 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
KRTAP4-4Q9BYR3 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC1.19□□□□□ -2.22
KRTAP4-4Q9BYR3 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
KRTAP4-4Q9BYR3 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
KRTAP4-4Q9BYR3 MYBPC1-209ENST00000547509 3749 ntAPPRIS ALT2 TSL 5 BASIC1.19□□□□□ -2.22
KRTAP4-4Q9BYR3 SOX6-201ENST00000316399 8808 ntAPPRIS P3 TSL 5 BASIC1.19□□□□□ -2.22
KRTAP4-4Q9BYR3 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC1.19□□□□□ -2.22
KRTAP4-4Q9BYR3 NSD1-204ENST00000439151 12892 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
KRTAP4-4Q9BYR3 ALG14-201ENST00000370205 9367 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
KRTAP4-4Q9BYR3 ZNF521-203ENST00000538137 4253 ntAPPRIS P1 TSL 2 BASIC1.19□□□□□ -2.22
KRTAP4-4Q9BYR3 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC1.19□□□□□ -2.22
KRTAP4-4Q9BYR3 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC1.19□□□□□ -2.22
KRTAP4-4Q9BYR3 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC1.19□□□□□ -2.22
KRTAP4-4Q9BYR3 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
KRTAP4-4Q9BYR3 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
KRTAP4-4Q9BYR3 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC1.19□□□□□ -2.22
KRTAP4-4Q9BYR3 ANKRD17-203ENST00000509867 8105 ntAPPRIS ALT2 TSL 1 (best) BASIC1.19□□□□□ -2.22
KRTAP4-4Q9BYR3 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC1.19□□□□□ -2.22
KRTAP4-4Q9BYR3 LZTFL1-201ENST00000296135 4073 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
KRTAP4-4Q9BYR3 SLC17A4-201ENST00000377905 3616 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
KRTAP4-4Q9BYR3 SLC16A9-201ENST00000395347 3646 ntAPPRIS P1 TSL 2 BASIC1.19□□□□□ -2.22
KRTAP4-4Q9BYR3 SEC31A-209ENST00000500777 3610 ntTSL 5 BASIC1.19□□□□□ -2.22
KRTAP4-4Q9BYR3 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
KRTAP4-4Q9BYR3 TNFSF4-201ENST00000281834 3470 ntAPPRIS P1 TSL 1 (best) BASIC1.19□□□□□ -2.22
KRTAP4-4Q9BYR3 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 PDGFRA-201ENST00000257290 6576 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 ADGRG2-206ENST00000360279 4702 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 MAP3K19-201ENST00000358371 3719 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 DSC3-201ENST00000360428 6939 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 KIAA0825-203ENST00000513200 4942 ntTSL 5 BASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 TEK-201ENST00000380036 4760 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 HCG18-237ENST00000444126 4605 ntTSL 5 BASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 AC083843.2-201ENST00000568248 6253 ntBASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 R3HDM1-220ENST00000628915 4325 ntTSL 5 BASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 ZNF808-201ENST00000359798 3600 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 CCDC68-202ENST00000432185 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 MKKS-201ENST00000347364 6714 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 PUM2-201ENST00000319801 6002 ntTSL 1 (best) BASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 ZNF260-204ENST00000592282 5055 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 KLF18-201ENST00000634670 3159 ntAPPRIS P1 TSL 5 BASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 AC000403.1-201ENST00000613696 3585 ntBASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 MRC1-201ENST00000569591 5198 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 VPS13D-214ENST00000620676 16320 ntAPPRIS P4 TSL 1 (best) BASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 RNA5SP110-201ENST00000362638 115 ntBASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 Y_RNA.40-201ENST00000362645 93 ntBASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 RNU6-836P-201ENST00000362920 107 ntBASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 RNU1-20P-201ENST00000363314 162 ntBASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 Y_RNA.125-201ENST00000363371 111 ntBASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 SNORA38B-201ENST00000363524 131 ntBASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 RNU1-84P-201ENST00000365447 164 ntBASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 RN7SKP187-201ENST00000365536 330 ntBASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 RNU6-1024P-201ENST00000384199 107 ntBASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 RNU6-225P-201ENST00000384613 103 ntBASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 MIR216B-201ENST00000390186 82 ntBASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 SNORD115.2-201ENST00000391126 59 ntBASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 SNORA12-201ENST00000391162 147 ntBASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 RNA5SP474-201ENST00000391234 90 ntBASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 RNU6-995P-201ENST00000391244 107 ntBASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 RN7SKP281-201ENST00000410472 352 ntBASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 AC244452.1-201ENST00000413798 141 ntBASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 UQCRHP1-204ENST00000424609 274 ntBASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 AL139148.1-201ENST00000427122 680 ntBASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 RPL12P16-201ENST00000431098 498 ntBASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 AC108479.1-201ENST00000431142 427 ntBASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 MYL6P3-201ENST00000436904 432 ntBASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 AC027119.1-201ENST00000440877 241 ntBASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 RNU7-14P-201ENST00000459331 62 ntBASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 snoU13.16-201ENST00000459350 104 ntBASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 snoU13.26-201ENST00000459452 105 ntBASIC1.18□□□□□ -2.22
KRTAP4-4Q9BYR3 PGAP2-210ENST00000464441 699 ntTSL 5 BASIC1.18□□□□□ -2.22
Retrieved 100 of 98,524 protein–RNA pairs in 119.3 ms