Protein–RNA interactions for Protein: Q9BYQ2

KRTAP9-4, Keratin-associated protein 9-4, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP9-4Q9BYQ2 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
KRTAP9-4Q9BYQ2 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
KRTAP9-4Q9BYQ2 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC2.02□□□□□ -2.09
KRTAP9-4Q9BYQ2 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP9-4Q9BYQ2 ZHX3-201ENST00000309060 10030 ntAPPRIS P1 TSL 5 BASIC2.02□□□□□ -2.09
KRTAP9-4Q9BYQ2 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
KRTAP9-4Q9BYQ2 NUP214-202ENST00000411637 7538 ntAPPRIS ALT2 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP9-4Q9BYQ2 ATP1B4-203ENST00000539306 4644 ntTSL 2 BASIC2.02□□□□□ -2.09
KRTAP9-4Q9BYQ2 AL136164.3-201ENST00000624429 3978 ntBASIC2.02□□□□□ -2.09
KRTAP9-4Q9BYQ2 ADGRL3-214ENST00000511324 5042 ntTSL 5 BASIC2.02□□□□□ -2.09
KRTAP9-4Q9BYQ2 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP9-4Q9BYQ2 CIITA-201ENST00000324288 11952 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP9-4Q9BYQ2 ITPR1-203ENST00000357086 9762 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP9-4Q9BYQ2 CD109-201ENST00000287097 9130 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP9-4Q9BYQ2 KAT6B-203ENST00000372714 5892 ntAPPRIS ALT2 TSL 5 BASIC2.02□□□□□ -2.09
KRTAP9-4Q9BYQ2 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP9-4Q9BYQ2 LHX9-201ENST00000367387 7836 ntAPPRIS P3 TSL 1 (best) BASIC2.02□□□□□ -2.09
KRTAP9-4Q9BYQ2 SLC35A3-201ENST00000370153 5708 ntTSL 5 BASIC2.02□□□□□ -2.09
KRTAP9-4Q9BYQ2 AC015849.5-201ENST00000604907 5473 ntTSL 2 BASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 SRCAP-201ENST00000262518 11754 ntAPPRIS P1 TSL 2 BASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 TSC1-203ENST00000440111 8463 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 ZDBF2-201ENST00000374423 10286 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 UNC79-202ENST00000393151 7908 ntTSL 5 BASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 NFATC3-202ENST00000346183 6040 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 MID1-202ENST00000380779 6044 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 SCN8A-201ENST00000354534 11556 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 RUNX1T1-205ENST00000436581 7454 ntTSL 5 BASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 SLC35A5-206ENST00000492406 4399 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 MON2-202ENST00000393630 13275 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 RNU6-392P-201ENST00000364926 101 ntBASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 Y_RNA.406-201ENST00000383984 100 ntBASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 RNU6V-201ENST00000384105 107 ntBASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 SNORD28-201ENST00000384706 75 ntBASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 MIR199B-201ENST00000384849 110 ntBASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 TRAJ46-201ENST00000390491 63 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 MIR1204-201ENST00000408388 67 ntBASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 AL133547.1-201ENST00000448546 220 ntBASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 AL157371.1-201ENST00000451910 394 ntTSL 3 BASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 RN7SL390P-201ENST00000470634 284 ntBASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 RPS4XP23-201ENST00000487801 237 ntBASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 RNU2-58P-201ENST00000516403 183 ntBASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 SNORA48.11-201ENST00000517015 89 ntBASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 SNORA44.1-201ENST00000517031 108 ntBASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 AC126177.5-201ENST00000549599 178 ntBASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 CYP3A54P-201ENST00000566950 75 ntBASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 MIR4310-201ENST00000582950 57 ntBASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 AC008739.3-201ENST00000603262 127 ntBASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 MIR6849-201ENST00000618543 69 ntBASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 Six3os1_1.1-201ENST00000620900 87 ntBASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 MIR6813-201ENST00000621638 56 ntBASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 SLC35E3-202ENST00000398004 17791 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 OR52K1-202ENST00000641528 5456 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 ATP10B-202ENST00000327245 7566 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 HYDIN2-203ENST00000614586 13885 ntBASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 ACACA-226ENST00000612895 9624 ntTSL 5 BASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 IL1RAP-202ENST00000317757 5413 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 ARHGAP28-201ENST00000262227 5369 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 ITSN1-206ENST00000381318 17015 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 C9orf84-203ENST00000374287 4721 ntAPPRIS P3 TSL 5 BASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 KIF4A-201ENST00000374403 4348 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 INTS6-202ENST00000398119 7041 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 TMEM67-205ENST00000453321 4651 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 DCX-203ENST00000371993 9231 ntAPPRIS ALT1 TSL 5 BASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 SLC26A7-201ENST00000276609 5263 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 CLTC-201ENST00000269122 7760 ntAPPRIS P3 TSL 1 (best) BASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 ZFPM2-203ENST00000517361 3300 ntTSL 2 BASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC2.01□□□□□ -2.09
KRTAP9-4Q9BYQ2 NRCAM-203ENST00000379024 5782 ntTSL 1 (best) BASIC2□□□□□ -2.09
KRTAP9-4Q9BYQ2 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC2□□□□□ -2.09
KRTAP9-4Q9BYQ2 RIMKLB-207ENST00000538135 5392 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
KRTAP9-4Q9BYQ2 LARP4-203ENST00000398473 6427 ntAPPRIS P3 TSL 1 (best) BASIC2□□□□□ -2.09
KRTAP9-4Q9BYQ2 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC2□□□□□ -2.09
KRTAP9-4Q9BYQ2 FAM135A-207ENST00000457062 5282 ntAPPRIS P3 TSL 1 (best) BASIC2□□□□□ -2.09
KRTAP9-4Q9BYQ2 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC2□□□□□ -2.09
KRTAP9-4Q9BYQ2 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
KRTAP9-4Q9BYQ2 SIPA1L1-201ENST00000358550 6539 ntAPPRIS ALT1 TSL 2 BASIC2□□□□□ -2.09
KRTAP9-4Q9BYQ2 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC2□□□□□ -2.09
KRTAP9-4Q9BYQ2 ITGA2-201ENST00000296585 7869 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
KRTAP9-4Q9BYQ2 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC2□□□□□ -2.09
KRTAP9-4Q9BYQ2 ZNF407-203ENST00000577538 5794 ntAPPRIS ALT2 TSL 2 BASIC2□□□□□ -2.09
KRTAP9-4Q9BYQ2 WDCP-202ENST00000406895 3700 ntAPPRIS ALT2 TSL 1 (best) BASIC2□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 168.2 ms