Protein–RNA interactions for Protein: R4GMW8

BIVM-ERCC5, BIVM-ERCC5 readthrough, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BIVM-ERCC5R4GMW8 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
BIVM-ERCC5R4GMW8 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
BIVM-ERCC5R4GMW8 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
BIVM-ERCC5R4GMW8 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC31.61■■■□□ 2.65
BIVM-ERCC5R4GMW8 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC31.61■■■□□ 2.65
BIVM-ERCC5R4GMW8 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC31.6■■■□□ 2.65
BIVM-ERCC5R4GMW8 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC31.6■■■□□ 2.65
BIVM-ERCC5R4GMW8 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC31.6■■■□□ 2.65
BIVM-ERCC5R4GMW8 LINC00265-3P-201ENST00000447588 903 ntBASIC31.6■■■□□ 2.65
BIVM-ERCC5R4GMW8 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC31.6■■■□□ 2.65
BIVM-ERCC5R4GMW8 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
BIVM-ERCC5R4GMW8 AC008556.1-201ENST00000610908 2040 ntBASIC31.6■■■□□ 2.65
BIVM-ERCC5R4GMW8 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC31.6■■■□□ 2.65
BIVM-ERCC5R4GMW8 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
BIVM-ERCC5R4GMW8 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC31.6■■■□□ 2.65
BIVM-ERCC5R4GMW8 SAE1-203ENST00000413379 2313 ntTSL 2 BASIC31.6■■■□□ 2.65
BIVM-ERCC5R4GMW8 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC31.6■■■□□ 2.65
BIVM-ERCC5R4GMW8 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC31.6■■■□□ 2.65
BIVM-ERCC5R4GMW8 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
BIVM-ERCC5R4GMW8 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC31.6■■■□□ 2.65
BIVM-ERCC5R4GMW8 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC31.6■■■□□ 2.65
BIVM-ERCC5R4GMW8 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC31.6■■■□□ 2.65
BIVM-ERCC5R4GMW8 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC31.6■■■□□ 2.65
BIVM-ERCC5R4GMW8 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC31.6■■■□□ 2.65
BIVM-ERCC5R4GMW8 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC31.6■■■□□ 2.65
BIVM-ERCC5R4GMW8 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC31.6■■■□□ 2.65
BIVM-ERCC5R4GMW8 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC31.6■■■□□ 2.65
BIVM-ERCC5R4GMW8 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
BIVM-ERCC5R4GMW8 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
BIVM-ERCC5R4GMW8 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
BIVM-ERCC5R4GMW8 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC31.59■■■□□ 2.65
BIVM-ERCC5R4GMW8 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
BIVM-ERCC5R4GMW8 TRIM3-201ENST00000345851 2879 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
BIVM-ERCC5R4GMW8 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
BIVM-ERCC5R4GMW8 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC31.59■■■□□ 2.65
BIVM-ERCC5R4GMW8 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
BIVM-ERCC5R4GMW8 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC31.59■■■□□ 2.65
BIVM-ERCC5R4GMW8 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
BIVM-ERCC5R4GMW8 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC31.59■■■□□ 2.65
BIVM-ERCC5R4GMW8 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
BIVM-ERCC5R4GMW8 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
BIVM-ERCC5R4GMW8 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
BIVM-ERCC5R4GMW8 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
BIVM-ERCC5R4GMW8 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC31.59■■■□□ 2.65
BIVM-ERCC5R4GMW8 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC31.59■■■□□ 2.65
BIVM-ERCC5R4GMW8 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC31.59■■■□□ 2.65
BIVM-ERCC5R4GMW8 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC31.59■■■□□ 2.65
BIVM-ERCC5R4GMW8 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
BIVM-ERCC5R4GMW8 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC31.58■■■□□ 2.65
BIVM-ERCC5R4GMW8 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC31.58■■■□□ 2.65
BIVM-ERCC5R4GMW8 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC31.58■■■□□ 2.65
BIVM-ERCC5R4GMW8 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC31.58■■■□□ 2.65
BIVM-ERCC5R4GMW8 AL845331.1-201ENST00000424978 1190 ntBASIC31.58■■■□□ 2.65
BIVM-ERCC5R4GMW8 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC31.58■■■□□ 2.65
BIVM-ERCC5R4GMW8 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC31.58■■■□□ 2.65
BIVM-ERCC5R4GMW8 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC31.58■■■□□ 2.65
BIVM-ERCC5R4GMW8 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC31.58■■■□□ 2.65
BIVM-ERCC5R4GMW8 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC31.58■■■□□ 2.65
BIVM-ERCC5R4GMW8 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC31.58■■■□□ 2.65
BIVM-ERCC5R4GMW8 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC31.58■■■□□ 2.65
BIVM-ERCC5R4GMW8 FBXO27-201ENST00000292853 2330 ntAPPRIS P2 TSL 1 (best) BASIC31.57■■■□□ 2.64
BIVM-ERCC5R4GMW8 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC31.57■■■□□ 2.64
BIVM-ERCC5R4GMW8 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC31.57■■■□□ 2.64
BIVM-ERCC5R4GMW8 AL137060.1-201ENST00000618151 2648 ntBASIC31.57■■■□□ 2.64
BIVM-ERCC5R4GMW8 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC31.57■■■□□ 2.64
BIVM-ERCC5R4GMW8 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC31.57■■■□□ 2.64
BIVM-ERCC5R4GMW8 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC31.57■■■□□ 2.64
BIVM-ERCC5R4GMW8 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
BIVM-ERCC5R4GMW8 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC31.57■■■□□ 2.64
BIVM-ERCC5R4GMW8 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
BIVM-ERCC5R4GMW8 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
BIVM-ERCC5R4GMW8 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC31.57■■■□□ 2.64
BIVM-ERCC5R4GMW8 AC106795.1-205ENST00000512851 1056 ntBASIC31.57■■■□□ 2.64
BIVM-ERCC5R4GMW8 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC31.57■■■□□ 2.64
BIVM-ERCC5R4GMW8 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
BIVM-ERCC5R4GMW8 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC31.56■■■□□ 2.64
BIVM-ERCC5R4GMW8 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
BIVM-ERCC5R4GMW8 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
BIVM-ERCC5R4GMW8 Z83836.1-201ENST00000624605 1642 ntBASIC31.56■■■□□ 2.64
BIVM-ERCC5R4GMW8 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
BIVM-ERCC5R4GMW8 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC31.56■■■□□ 2.64
BIVM-ERCC5R4GMW8 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC31.56■■■□□ 2.64
BIVM-ERCC5R4GMW8 AKR1C7P-201ENST00000305623 895 ntBASIC31.56■■■□□ 2.64
BIVM-ERCC5R4GMW8 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
BIVM-ERCC5R4GMW8 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC31.56■■■□□ 2.64
BIVM-ERCC5R4GMW8 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC31.56■■■□□ 2.64
BIVM-ERCC5R4GMW8 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC31.56■■■□□ 2.64
BIVM-ERCC5R4GMW8 PNN-202ENST00000553331 656 ntTSL 3 BASIC31.56■■■□□ 2.64
BIVM-ERCC5R4GMW8 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC31.56■■■□□ 2.64
BIVM-ERCC5R4GMW8 AC023511.2-201ENST00000618803 211 ntBASIC31.56■■■□□ 2.64
BIVM-ERCC5R4GMW8 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC31.56■■■□□ 2.64
BIVM-ERCC5R4GMW8 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC31.55■■■□□ 2.64
BIVM-ERCC5R4GMW8 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC31.55■■■□□ 2.64
BIVM-ERCC5R4GMW8 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
BIVM-ERCC5R4GMW8 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC31.55■■■□□ 2.64
BIVM-ERCC5R4GMW8 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC31.55■■■□□ 2.64
BIVM-ERCC5R4GMW8 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC31.55■■■□□ 2.64
BIVM-ERCC5R4GMW8 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC31.55■■■□□ 2.64
BIVM-ERCC5R4GMW8 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC31.55■■■□□ 2.64
BIVM-ERCC5R4GMW8 AC233702.3-201ENST00000578656 1387 ntBASIC31.55■■■□□ 2.64
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms