Protein–RNA interactions for Protein: Q9Y625

GPC6, Glypican-6, humanhuman

Predicted RBP Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6Q9Y625 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
GPC6Q9Y625 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
GPC6Q9Y625 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GPC6Q9Y625 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GPC6Q9Y625 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
GPC6Q9Y625 ZNF302-215ENST00000627982 1723 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
GPC6Q9Y625 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
GPC6Q9Y625 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GPC6Q9Y625 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.91■□□□□ 0.46
GPC6Q9Y625 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GPC6Q9Y625 FAM66C-209ENST00000544214 2623 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
GPC6Q9Y625 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GPC6Q9Y625 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GPC6Q9Y625 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC17.91■□□□□ 0.46
GPC6Q9Y625 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GPC6Q9Y625 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC17.91■□□□□ 0.46
GPC6Q9Y625 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC17.91■□□□□ 0.46
GPC6Q9Y625 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
GPC6Q9Y625 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC17.91■□□□□ 0.46
GPC6Q9Y625 AC073316.3-201ENST00000437354 982 ntTSL 3 BASIC17.91■□□□□ 0.46
GPC6Q9Y625 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.91■□□□□ 0.46
GPC6Q9Y625 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
GPC6Q9Y625 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
GPC6Q9Y625 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
GPC6Q9Y625 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC17.91■□□□□ 0.46
GPC6Q9Y625 KRT18P16-201ENST00000510337 1294 ntBASIC17.91■□□□□ 0.46
GPC6Q9Y625 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
GPC6Q9Y625 MIR4651-201ENST00000582622 73 ntBASIC17.91■□□□□ 0.46
GPC6Q9Y625 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
GPC6Q9Y625 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.91■□□□□ 0.46
GPC6Q9Y625 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.91■□□□□ 0.46
GPC6Q9Y625 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC17.91■□□□□ 0.46
GPC6Q9Y625 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GPC6Q9Y625 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
GPC6Q9Y625 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
GPC6Q9Y625 AC020763.4-201ENST00000623414 4170 ntBASIC17.91■□□□□ 0.46
GPC6Q9Y625 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC17.91■□□□□ 0.46
GPC6Q9Y625 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.91■□□□□ 0.46
GPC6Q9Y625 AL138781.2-201ENST00000617896 1843 ntBASIC17.91■□□□□ 0.46
GPC6Q9Y625 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
GPC6Q9Y625 AC006333.2-201ENST00000607957 2099 ntBASIC17.91■□□□□ 0.46
GPC6Q9Y625 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GPC6Q9Y625 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC17.9■□□□□ 0.46
GPC6Q9Y625 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC17.9■□□□□ 0.46
GPC6Q9Y625 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
GPC6Q9Y625 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GPC6Q9Y625 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
GPC6Q9Y625 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GPC6Q9Y625 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
GPC6Q9Y625 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
GPC6Q9Y625 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GPC6Q9Y625 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GPC6Q9Y625 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC17.9■□□□□ 0.46
GPC6Q9Y625 TREX2-204ENST00000370212 861 ntTSL 5 BASIC17.9■□□□□ 0.46
GPC6Q9Y625 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
GPC6Q9Y625 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC17.9■□□□□ 0.46
GPC6Q9Y625 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC17.9■□□□□ 0.46
GPC6Q9Y625 FAM201B-201ENST00000458407 597 ntBASIC17.9■□□□□ 0.46
GPC6Q9Y625 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC17.9■□□□□ 0.46
GPC6Q9Y625 PRKY-204ENST00000533551 1019 ntBASIC17.9■□□□□ 0.46
GPC6Q9Y625 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC17.9■□□□□ 0.46
GPC6Q9Y625 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GPC6Q9Y625 AC069544.1-201ENST00000609399 999 ntBASIC17.9■□□□□ 0.46
GPC6Q9Y625 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GPC6Q9Y625 GTF2IRD2B-206ENST00000614064 573 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GPC6Q9Y625 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
GPC6Q9Y625 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.9■□□□□ 0.46
GPC6Q9Y625 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GPC6Q9Y625 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
GPC6Q9Y625 C19orf84-202ENST00000574814 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
GPC6Q9Y625 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
GPC6Q9Y625 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.9■□□□□ 0.46
GPC6Q9Y625 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
GPC6Q9Y625 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
GPC6Q9Y625 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC17.9■□□□□ 0.46
GPC6Q9Y625 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
GPC6Q9Y625 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
GPC6Q9Y625 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.46
GPC6Q9Y625 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.46
GPC6Q9Y625 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC17.89■□□□□ 0.46
GPC6Q9Y625 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.89■□□□□ 0.46
GPC6Q9Y625 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC17.89■□□□□ 0.46
GPC6Q9Y625 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.89■□□□□ 0.45
GPC6Q9Y625 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC17.89■□□□□ 0.45
GPC6Q9Y625 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC17.89■□□□□ 0.45
GPC6Q9Y625 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
GPC6Q9Y625 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
GPC6Q9Y625 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.89■□□□□ 0.45
GPC6Q9Y625 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
GPC6Q9Y625 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
GPC6Q9Y625 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
GPC6Q9Y625 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
GPC6Q9Y625 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
GPC6Q9Y625 H3F3A-204ENST00000366816 799 ntAPPRIS P1 TSL 3 BASIC17.89■□□□□ 0.45
GPC6Q9Y625 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC17.89■□□□□ 0.45
GPC6Q9Y625 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
GPC6Q9Y625 EPHA5-AS1-202ENST00000509473 1177 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
GPC6Q9Y625 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
GPC6Q9Y625 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
GPC6Q9Y625 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms