Protein–RNA interactions for Protein: Q9Y5E1

PCDHB9, Protocadherin beta-9, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB9Q9Y5E1 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB9Q9Y5E1 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB9Q9Y5E1 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB9Q9Y5E1 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB9Q9Y5E1 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHB9Q9Y5E1 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB9Q9Y5E1 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHB9Q9Y5E1 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.26■□□□□ 0.67
PCDHB9Q9Y5E1 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB9Q9Y5E1 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.26■□□□□ 0.67
PCDHB9Q9Y5E1 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB9Q9Y5E1 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB9Q9Y5E1 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB9Q9Y5E1 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB9Q9Y5E1 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC19.26■□□□□ 0.67
PCDHB9Q9Y5E1 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB9Q9Y5E1 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB9Q9Y5E1 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB9Q9Y5E1 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC19.26■□□□□ 0.67
PCDHB9Q9Y5E1 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
PCDHB9Q9Y5E1 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
PCDHB9Q9Y5E1 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB9Q9Y5E1 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB9Q9Y5E1 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB9Q9Y5E1 AC096733.2-201ENST00000609937 1394 ntBASIC19.25■□□□□ 0.67
PCDHB9Q9Y5E1 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB9Q9Y5E1 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
PCDHB9Q9Y5E1 MFAP1P1-201ENST00000442257 1255 ntBASIC19.25■□□□□ 0.67
PCDHB9Q9Y5E1 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDHB9Q9Y5E1 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB9Q9Y5E1 PRSS44-201ENST00000515154 1146 ntBASIC19.25■□□□□ 0.67
PCDHB9Q9Y5E1 CKBP1-201ENST00000565489 1086 ntBASIC19.25■□□□□ 0.67
PCDHB9Q9Y5E1 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
PCDHB9Q9Y5E1 KANSL1-218ENST00000638275 5352 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDHB9Q9Y5E1 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB9Q9Y5E1 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDHB9Q9Y5E1 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
PCDHB9Q9Y5E1 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.25■□□□□ 0.67
PCDHB9Q9Y5E1 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC19.25■□□□□ 0.67
PCDHB9Q9Y5E1 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB9Q9Y5E1 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
PCDHB9Q9Y5E1 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB9Q9Y5E1 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDHB9Q9Y5E1 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB9Q9Y5E1 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDHB9Q9Y5E1 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
PCDHB9Q9Y5E1 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
PCDHB9Q9Y5E1 SHROOM1-202ENST00000378676 2352 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
PCDHB9Q9Y5E1 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB9Q9Y5E1 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.24■□□□□ 0.67
PCDHB9Q9Y5E1 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PCDHB9Q9Y5E1 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.24■□□□□ 0.67
PCDHB9Q9Y5E1 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHB9Q9Y5E1 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.24■□□□□ 0.67
PCDHB9Q9Y5E1 AC063952.2-201ENST00000498792 1227 ntBASIC19.24■□□□□ 0.67
PCDHB9Q9Y5E1 KRT18P56-201ENST00000507275 550 ntBASIC19.24■□□□□ 0.67
PCDHB9Q9Y5E1 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB9Q9Y5E1 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC19.24■□□□□ 0.67
PCDHB9Q9Y5E1 CYGB-204ENST00000589342 815 ntTSL 3 BASIC19.24■□□□□ 0.67
PCDHB9Q9Y5E1 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PCDHB9Q9Y5E1 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
PCDHB9Q9Y5E1 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB9Q9Y5E1 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.24■□□□□ 0.67
PCDHB9Q9Y5E1 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
PCDHB9Q9Y5E1 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB9Q9Y5E1 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB9Q9Y5E1 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHB9Q9Y5E1 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
PCDHB9Q9Y5E1 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
PCDHB9Q9Y5E1 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDHB9Q9Y5E1 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.24■□□□□ 0.67
PCDHB9Q9Y5E1 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.24■□□□□ 0.67
PCDHB9Q9Y5E1 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB9Q9Y5E1 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB9Q9Y5E1 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB9Q9Y5E1 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB9Q9Y5E1 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDHB9Q9Y5E1 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.23■□□□□ 0.67
PCDHB9Q9Y5E1 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDHB9Q9Y5E1 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC19.23■□□□□ 0.67
PCDHB9Q9Y5E1 TPM4P1-201ENST00000436100 807 ntBASIC19.23■□□□□ 0.67
PCDHB9Q9Y5E1 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
PCDHB9Q9Y5E1 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.23■□□□□ 0.67
PCDHB9Q9Y5E1 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC19.23■□□□□ 0.67
PCDHB9Q9Y5E1 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.23■□□□□ 0.67
PCDHB9Q9Y5E1 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC19.23■□□□□ 0.67
PCDHB9Q9Y5E1 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.23■□□□□ 0.67
PCDHB9Q9Y5E1 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC19.23■□□□□ 0.67
PCDHB9Q9Y5E1 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
PCDHB9Q9Y5E1 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC19.22■□□□□ 0.67
PCDHB9Q9Y5E1 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB9Q9Y5E1 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC19.22■□□□□ 0.67
PCDHB9Q9Y5E1 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB9Q9Y5E1 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB9Q9Y5E1 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.22■□□□□ 0.67
PCDHB9Q9Y5E1 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB9Q9Y5E1 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB9Q9Y5E1 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
PCDHB9Q9Y5E1 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
PCDHB9Q9Y5E1 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 21.2 ms