Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
R3HCC1Q9Y3T6 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC21.64■■□□□ 1.06
R3HCC1Q9Y3T6 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
R3HCC1Q9Y3T6 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
R3HCC1Q9Y3T6 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
R3HCC1Q9Y3T6 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
R3HCC1Q9Y3T6 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC21.64■■□□□ 1.05
R3HCC1Q9Y3T6 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC21.64■■□□□ 1.05
R3HCC1Q9Y3T6 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
R3HCC1Q9Y3T6 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
R3HCC1Q9Y3T6 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
R3HCC1Q9Y3T6 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.64■■□□□ 1.05
R3HCC1Q9Y3T6 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
R3HCC1Q9Y3T6 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
R3HCC1Q9Y3T6 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
R3HCC1Q9Y3T6 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
R3HCC1Q9Y3T6 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
R3HCC1Q9Y3T6 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC21.64■■□□□ 1.05
R3HCC1Q9Y3T6 BZW1-209ENST00000452790 1473 ntTSL 2 BASIC21.64■■□□□ 1.05
R3HCC1Q9Y3T6 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
R3HCC1Q9Y3T6 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC21.64■■□□□ 1.05
R3HCC1Q9Y3T6 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
R3HCC1Q9Y3T6 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC21.63■■□□□ 1.05
R3HCC1Q9Y3T6 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
R3HCC1Q9Y3T6 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
R3HCC1Q9Y3T6 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC21.63■■□□□ 1.05
R3HCC1Q9Y3T6 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC21.63■■□□□ 1.05
R3HCC1Q9Y3T6 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC21.63■■□□□ 1.05
R3HCC1Q9Y3T6 PRORSD1P-202ENST00000563365 2154 ntBASIC21.63■■□□□ 1.05
R3HCC1Q9Y3T6 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
R3HCC1Q9Y3T6 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
R3HCC1Q9Y3T6 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
R3HCC1Q9Y3T6 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
R3HCC1Q9Y3T6 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.63■■□□□ 1.05
R3HCC1Q9Y3T6 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC21.63■■□□□ 1.05
R3HCC1Q9Y3T6 ABHD17AP6-201ENST00000458502 1044 ntBASIC21.63■■□□□ 1.05
R3HCC1Q9Y3T6 ZNF346-203ENST00000503425 1191 ntTSL 2 BASIC21.63■■□□□ 1.05
R3HCC1Q9Y3T6 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
R3HCC1Q9Y3T6 SOX15-203ENST00000570788 1093 ntBASIC21.63■■□□□ 1.05
R3HCC1Q9Y3T6 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC21.63■■□□□ 1.05
R3HCC1Q9Y3T6 AL031963.3-201ENST00000606441 850 ntBASIC21.63■■□□□ 1.05
R3HCC1Q9Y3T6 JADE2-211ENST00000612830 1251 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
R3HCC1Q9Y3T6 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
R3HCC1Q9Y3T6 AC006557.6-201ENST00000623071 864 ntBASIC21.63■■□□□ 1.05
R3HCC1Q9Y3T6 QPCTL-202ENST00000366382 1814 ntTSL 2 BASIC21.63■■□□□ 1.05
R3HCC1Q9Y3T6 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
R3HCC1Q9Y3T6 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC21.63■■□□□ 1.05
R3HCC1Q9Y3T6 CMPK2-201ENST00000256722 2884 ntAPPRIS P3 TSL 1 (best) BASIC21.63■■□□□ 1.05
R3HCC1Q9Y3T6 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC21.63■■□□□ 1.05
R3HCC1Q9Y3T6 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
R3HCC1Q9Y3T6 FAM76A-205ENST00000419687 1661 ntTSL 2 BASIC21.63■■□□□ 1.05
R3HCC1Q9Y3T6 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
R3HCC1Q9Y3T6 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
R3HCC1Q9Y3T6 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
R3HCC1Q9Y3T6 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC21.62■■□□□ 1.05
R3HCC1Q9Y3T6 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
R3HCC1Q9Y3T6 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC21.62■■□□□ 1.05
R3HCC1Q9Y3T6 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
R3HCC1Q9Y3T6 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
R3HCC1Q9Y3T6 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
R3HCC1Q9Y3T6 CCDC137-201ENST00000329214 2468 ntAPPRIS P2 TSL 1 (best) BASIC21.62■■□□□ 1.05
R3HCC1Q9Y3T6 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
R3HCC1Q9Y3T6 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC21.62■■□□□ 1.05
R3HCC1Q9Y3T6 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
R3HCC1Q9Y3T6 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
R3HCC1Q9Y3T6 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
R3HCC1Q9Y3T6 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
R3HCC1Q9Y3T6 CABP2-202ENST00000353903 789 ntAPPRIS P1 TSL 5 BASIC21.62■■□□□ 1.05
R3HCC1Q9Y3T6 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
R3HCC1Q9Y3T6 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
R3HCC1Q9Y3T6 AP003097.1-201ENST00000530657 1135 ntBASIC21.62■■□□□ 1.05
R3HCC1Q9Y3T6 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.62■■□□□ 1.05
R3HCC1Q9Y3T6 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC21.62■■□□□ 1.05
R3HCC1Q9Y3T6 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC21.62■■□□□ 1.05
R3HCC1Q9Y3T6 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
R3HCC1Q9Y3T6 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC21.62■■□□□ 1.05
R3HCC1Q9Y3T6 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
R3HCC1Q9Y3T6 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC21.62■■□□□ 1.05
R3HCC1Q9Y3T6 KRT8P17-201ENST00000453110 1448 ntBASIC21.62■■□□□ 1.05
R3HCC1Q9Y3T6 KLF3-201ENST00000261438 5122 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
R3HCC1Q9Y3T6 SLC38A10-201ENST00000288439 2708 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
R3HCC1Q9Y3T6 WIZP1-201ENST00000531444 2299 ntBASIC21.62■■□□□ 1.05
R3HCC1Q9Y3T6 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC21.62■■□□□ 1.05
R3HCC1Q9Y3T6 BCL2-203ENST00000589955 5011 ntBASIC21.62■■□□□ 1.05
R3HCC1Q9Y3T6 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
R3HCC1Q9Y3T6 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
R3HCC1Q9Y3T6 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC21.61■■□□□ 1.05
R3HCC1Q9Y3T6 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
R3HCC1Q9Y3T6 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
R3HCC1Q9Y3T6 AC009053.2-201ENST00000563701 2365 ntBASIC21.61■■□□□ 1.05
R3HCC1Q9Y3T6 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC21.61■■□□□ 1.05
R3HCC1Q9Y3T6 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.61■■□□□ 1.05
R3HCC1Q9Y3T6 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC21.61■■□□□ 1.05
R3HCC1Q9Y3T6 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
R3HCC1Q9Y3T6 ARFRP1-213ENST00000619493 2456 ntAPPRIS P1 TSL 3 BASIC21.61■■□□□ 1.05
R3HCC1Q9Y3T6 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
R3HCC1Q9Y3T6 NEURL3-202ENST00000435380 1675 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
R3HCC1Q9Y3T6 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
R3HCC1Q9Y3T6 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
R3HCC1Q9Y3T6 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms