Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 ANO7L1-203ENST00000602586 1720 ntBASIC16.35■□□□□ 0.21
MRPS28Q9Y2Q9 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MRPS28Q9Y2Q9 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC16.35■□□□□ 0.21
MRPS28Q9Y2Q9 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
MRPS28Q9Y2Q9 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
MRPS28Q9Y2Q9 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC16.35■□□□□ 0.21
MRPS28Q9Y2Q9 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MRPS28Q9Y2Q9 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MRPS28Q9Y2Q9 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC16.35■□□□□ 0.21
MRPS28Q9Y2Q9 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MRPS28Q9Y2Q9 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MRPS28Q9Y2Q9 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
MRPS28Q9Y2Q9 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
MRPS28Q9Y2Q9 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MRPS28Q9Y2Q9 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
MRPS28Q9Y2Q9 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
MRPS28Q9Y2Q9 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MRPS28Q9Y2Q9 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.34■□□□□ 0.21
MRPS28Q9Y2Q9 AC026471.1-201ENST00000564629 3026 ntBASIC16.34■□□□□ 0.21
MRPS28Q9Y2Q9 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
MRPS28Q9Y2Q9 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MRPS28Q9Y2Q9 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MRPS28Q9Y2Q9 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
MRPS28Q9Y2Q9 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
MRPS28Q9Y2Q9 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC16.34■□□□□ 0.21
MRPS28Q9Y2Q9 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC16.34■□□□□ 0.21
MRPS28Q9Y2Q9 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC16.34■□□□□ 0.21
MRPS28Q9Y2Q9 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC16.34■□□□□ 0.21
MRPS28Q9Y2Q9 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC16.34■□□□□ 0.21
MRPS28Q9Y2Q9 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
MRPS28Q9Y2Q9 WT1-AS_3.1-201ENST00000613262 234 ntBASIC16.34■□□□□ 0.21
MRPS28Q9Y2Q9 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
MRPS28Q9Y2Q9 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MRPS28Q9Y2Q9 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
MRPS28Q9Y2Q9 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MRPS28Q9Y2Q9 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
MRPS28Q9Y2Q9 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC16.34■□□□□ 0.21
MRPS28Q9Y2Q9 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.34■□□□□ 0.21
MRPS28Q9Y2Q9 AR-207ENST00000612010 3896 ntTSL 5 BASIC16.34■□□□□ 0.21
MRPS28Q9Y2Q9 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
MRPS28Q9Y2Q9 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
MRPS28Q9Y2Q9 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC16.34■□□□□ 0.21
MRPS28Q9Y2Q9 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
MRPS28Q9Y2Q9 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC16.33■□□□□ 0.21
MRPS28Q9Y2Q9 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
MRPS28Q9Y2Q9 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.21
MRPS28Q9Y2Q9 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
MRPS28Q9Y2Q9 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
MRPS28Q9Y2Q9 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
MRPS28Q9Y2Q9 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.21
MRPS28Q9Y2Q9 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
MRPS28Q9Y2Q9 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.21
MRPS28Q9Y2Q9 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC16.33■□□□□ 0.21
MRPS28Q9Y2Q9 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
MRPS28Q9Y2Q9 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MRPS28Q9Y2Q9 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
MRPS28Q9Y2Q9 GUSBP6-202ENST00000438529 1198 ntBASIC16.33■□□□□ 0.2
MRPS28Q9Y2Q9 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MRPS28Q9Y2Q9 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MRPS28Q9Y2Q9 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MRPS28Q9Y2Q9 AC068987.1-201ENST00000562996 427 ntTSL 3 BASIC16.33■□□□□ 0.2
MRPS28Q9Y2Q9 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MRPS28Q9Y2Q9 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC16.33■□□□□ 0.2
MRPS28Q9Y2Q9 SOX15-203ENST00000570788 1093 ntBASIC16.33■□□□□ 0.2
MRPS28Q9Y2Q9 MYC-209ENST00000641252 345 ntBASIC16.33■□□□□ 0.2
MRPS28Q9Y2Q9 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC16.33■□□□□ 0.2
MRPS28Q9Y2Q9 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
MRPS28Q9Y2Q9 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MRPS28Q9Y2Q9 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MRPS28Q9Y2Q9 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
MRPS28Q9Y2Q9 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MRPS28Q9Y2Q9 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MRPS28Q9Y2Q9 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MRPS28Q9Y2Q9 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
MRPS28Q9Y2Q9 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.33■□□□□ 0.2
MRPS28Q9Y2Q9 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
MRPS28Q9Y2Q9 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.2
MRPS28Q9Y2Q9 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MRPS28Q9Y2Q9 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
MRPS28Q9Y2Q9 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
MRPS28Q9Y2Q9 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
MRPS28Q9Y2Q9 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
MRPS28Q9Y2Q9 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MRPS28Q9Y2Q9 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
MRPS28Q9Y2Q9 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
MRPS28Q9Y2Q9 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC16.33■□□□□ 0.2
MRPS28Q9Y2Q9 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MRPS28Q9Y2Q9 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MRPS28Q9Y2Q9 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC16.32■□□□□ 0.2
MRPS28Q9Y2Q9 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MRPS28Q9Y2Q9 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MRPS28Q9Y2Q9 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MRPS28Q9Y2Q9 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
MRPS28Q9Y2Q9 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.32■□□□□ 0.2
MRPS28Q9Y2Q9 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MRPS28Q9Y2Q9 TSPY6P-201ENST00000448518 926 ntBASIC16.32■□□□□ 0.2
MRPS28Q9Y2Q9 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.32■□□□□ 0.2
MRPS28Q9Y2Q9 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC16.32■□□□□ 0.2
MRPS28Q9Y2Q9 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC16.32■□□□□ 0.2
MRPS28Q9Y2Q9 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms