Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC17.38■□□□□ 0.37
RPH3AQ9Y2J0 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RPH3AQ9Y2J0 KRT8P9-201ENST00000558927 1449 ntBASIC17.38■□□□□ 0.37
RPH3AQ9Y2J0 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RPH3AQ9Y2J0 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.38■□□□□ 0.37
RPH3AQ9Y2J0 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RPH3AQ9Y2J0 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RPH3AQ9Y2J0 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RPH3AQ9Y2J0 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.38■□□□□ 0.37
RPH3AQ9Y2J0 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RPH3AQ9Y2J0 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC17.38■□□□□ 0.37
RPH3AQ9Y2J0 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RPH3AQ9Y2J0 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
RPH3AQ9Y2J0 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC17.38■□□□□ 0.37
RPH3AQ9Y2J0 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RPH3AQ9Y2J0 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RPH3AQ9Y2J0 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC17.38■□□□□ 0.37
RPH3AQ9Y2J0 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RPH3AQ9Y2J0 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.38■□□□□ 0.37
RPH3AQ9Y2J0 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RPH3AQ9Y2J0 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC17.38■□□□□ 0.37
RPH3AQ9Y2J0 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RPH3AQ9Y2J0 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RPH3AQ9Y2J0 AL020996.1-203ENST00000536896 2307 ntBASIC17.38■□□□□ 0.37
RPH3AQ9Y2J0 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
RPH3AQ9Y2J0 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC17.38■□□□□ 0.37
RPH3AQ9Y2J0 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RPH3AQ9Y2J0 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
RPH3AQ9Y2J0 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RPH3AQ9Y2J0 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RPH3AQ9Y2J0 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RPH3AQ9Y2J0 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RPH3AQ9Y2J0 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
RPH3AQ9Y2J0 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RPH3AQ9Y2J0 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RPH3AQ9Y2J0 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
RPH3AQ9Y2J0 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RPH3AQ9Y2J0 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RPH3AQ9Y2J0 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RPH3AQ9Y2J0 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RPH3AQ9Y2J0 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RPH3AQ9Y2J0 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RPH3AQ9Y2J0 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
RPH3AQ9Y2J0 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RPH3AQ9Y2J0 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.37■□□□□ 0.37
RPH3AQ9Y2J0 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RPH3AQ9Y2J0 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.37■□□□□ 0.37
RPH3AQ9Y2J0 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RPH3AQ9Y2J0 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
RPH3AQ9Y2J0 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RPH3AQ9Y2J0 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RPH3AQ9Y2J0 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RPH3AQ9Y2J0 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.37■□□□□ 0.37
RPH3AQ9Y2J0 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
RPH3AQ9Y2J0 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RPH3AQ9Y2J0 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RPH3AQ9Y2J0 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
RPH3AQ9Y2J0 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
RPH3AQ9Y2J0 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RPH3AQ9Y2J0 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC17.36■□□□□ 0.37
RPH3AQ9Y2J0 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RPH3AQ9Y2J0 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.36■□□□□ 0.37
RPH3AQ9Y2J0 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.36■□□□□ 0.37
RPH3AQ9Y2J0 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.36■□□□□ 0.37
RPH3AQ9Y2J0 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RPH3AQ9Y2J0 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RPH3AQ9Y2J0 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RPH3AQ9Y2J0 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RPH3AQ9Y2J0 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RPH3AQ9Y2J0 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.36■□□□□ 0.37
RPH3AQ9Y2J0 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.36■□□□□ 0.37
RPH3AQ9Y2J0 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RPH3AQ9Y2J0 MFAP1P1-201ENST00000442257 1255 ntBASIC17.36■□□□□ 0.37
RPH3AQ9Y2J0 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RPH3AQ9Y2J0 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC17.36■□□□□ 0.37
RPH3AQ9Y2J0 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC17.36■□□□□ 0.37
RPH3AQ9Y2J0 FITM1-202ENST00000559294 800 ntBASIC17.36■□□□□ 0.37
RPH3AQ9Y2J0 RN7SL850P-201ENST00000579959 291 ntBASIC17.36■□□□□ 0.37
RPH3AQ9Y2J0 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.36■□□□□ 0.37
RPH3AQ9Y2J0 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RPH3AQ9Y2J0 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.36■□□□□ 0.37
RPH3AQ9Y2J0 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC17.36■□□□□ 0.37
RPH3AQ9Y2J0 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.36■□□□□ 0.37
RPH3AQ9Y2J0 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RPH3AQ9Y2J0 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RPH3AQ9Y2J0 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.36■□□□□ 0.37
RPH3AQ9Y2J0 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RPH3AQ9Y2J0 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RPH3AQ9Y2J0 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
RPH3AQ9Y2J0 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.36■□□□□ 0.37
RPH3AQ9Y2J0 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RPH3AQ9Y2J0 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC17.36■□□□□ 0.37
RPH3AQ9Y2J0 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RPH3AQ9Y2J0 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RPH3AQ9Y2J0 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.36■□□□□ 0.37
RPH3AQ9Y2J0 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RPH3AQ9Y2J0 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPH3AQ9Y2J0 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPH3AQ9Y2J0 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RPH3AQ9Y2J0 AL032819.2-201ENST00000624543 2162 ntBASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms