Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.31■□□□□ 0.36
ERGIC3Q9Y282 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.31■□□□□ 0.36
ERGIC3Q9Y282 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.31■□□□□ 0.36
ERGIC3Q9Y282 LRP4-201ENST00000378623 8076 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ERGIC3Q9Y282 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ERGIC3Q9Y282 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ERGIC3Q9Y282 TMEM183A-201ENST00000367242 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ERGIC3Q9Y282 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
ERGIC3Q9Y282 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ERGIC3Q9Y282 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ERGIC3Q9Y282 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
ERGIC3Q9Y282 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ERGIC3Q9Y282 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ERGIC3Q9Y282 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ERGIC3Q9Y282 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ERGIC3Q9Y282 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
ERGIC3Q9Y282 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ERGIC3Q9Y282 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
ERGIC3Q9Y282 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ERGIC3Q9Y282 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC17.3■□□□□ 0.36
ERGIC3Q9Y282 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ERGIC3Q9Y282 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ERGIC3Q9Y282 DAPK1-207ENST00000469640 5899 ntTSL 5 BASIC17.3■□□□□ 0.36
ERGIC3Q9Y282 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ERGIC3Q9Y282 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ERGIC3Q9Y282 AC123595.1-201ENST00000440769 1046 ntBASIC17.3■□□□□ 0.36
ERGIC3Q9Y282 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.3■□□□□ 0.36
ERGIC3Q9Y282 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC17.3■□□□□ 0.36
ERGIC3Q9Y282 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ERGIC3Q9Y282 LGI4-206ENST00000591633 1113 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ERGIC3Q9Y282 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC17.3■□□□□ 0.36
ERGIC3Q9Y282 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ERGIC3Q9Y282 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
ERGIC3Q9Y282 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
ERGIC3Q9Y282 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ERGIC3Q9Y282 AC018553.1-201ENST00000616682 1458 ntBASIC17.3■□□□□ 0.36
ERGIC3Q9Y282 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ERGIC3Q9Y282 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
ERGIC3Q9Y282 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ERGIC3Q9Y282 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
ERGIC3Q9Y282 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ERGIC3Q9Y282 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC17.29■□□□□ 0.36
ERGIC3Q9Y282 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.29■□□□□ 0.36
ERGIC3Q9Y282 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ERGIC3Q9Y282 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ERGIC3Q9Y282 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ERGIC3Q9Y282 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC17.29■□□□□ 0.36
ERGIC3Q9Y282 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
ERGIC3Q9Y282 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
ERGIC3Q9Y282 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC17.29■□□□□ 0.36
ERGIC3Q9Y282 NOMO2-202ENST00000381474 3911 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ERGIC3Q9Y282 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC17.29■□□□□ 0.36
ERGIC3Q9Y282 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ERGIC3Q9Y282 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
ERGIC3Q9Y282 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC17.29■□□□□ 0.36
ERGIC3Q9Y282 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.29■□□□□ 0.36
ERGIC3Q9Y282 ESPNP-201ENST00000270691 2015 ntBASIC17.29■□□□□ 0.36
ERGIC3Q9Y282 STX17-205ENST00000525640 2523 ntAPPRIS P1 TSL 2 BASIC17.29■□□□□ 0.36
ERGIC3Q9Y282 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
ERGIC3Q9Y282 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC17.29■□□□□ 0.36
ERGIC3Q9Y282 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC17.29■□□□□ 0.36
ERGIC3Q9Y282 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
ERGIC3Q9Y282 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ERGIC3Q9Y282 AC008764.6-201ENST00000595909 2069 ntBASIC17.28■□□□□ 0.36
ERGIC3Q9Y282 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ERGIC3Q9Y282 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ERGIC3Q9Y282 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
ERGIC3Q9Y282 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ERGIC3Q9Y282 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.28■□□□□ 0.36
ERGIC3Q9Y282 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ERGIC3Q9Y282 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.28■□□□□ 0.36
ERGIC3Q9Y282 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.28■□□□□ 0.36
ERGIC3Q9Y282 AK1-201ENST00000223836 736 ntTSL 3 BASIC17.28■□□□□ 0.36
ERGIC3Q9Y282 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ERGIC3Q9Y282 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ERGIC3Q9Y282 PARP1-202ENST00000366792 553 ntTSL 3 BASIC17.28■□□□□ 0.36
ERGIC3Q9Y282 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.28■□□□□ 0.36
ERGIC3Q9Y282 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC17.28■□□□□ 0.36
ERGIC3Q9Y282 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ERGIC3Q9Y282 AC016405.3-201ENST00000607710 860 ntBASIC17.28■□□□□ 0.36
ERGIC3Q9Y282 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC17.28■□□□□ 0.36
ERGIC3Q9Y282 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ERGIC3Q9Y282 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ERGIC3Q9Y282 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
ERGIC3Q9Y282 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ERGIC3Q9Y282 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ERGIC3Q9Y282 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.28■□□□□ 0.36
ERGIC3Q9Y282 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.28■□□□□ 0.36
ERGIC3Q9Y282 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
ERGIC3Q9Y282 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC17.28■□□□□ 0.36
ERGIC3Q9Y282 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ERGIC3Q9Y282 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC17.27■□□□□ 0.36
ERGIC3Q9Y282 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC17.27■□□□□ 0.36
ERGIC3Q9Y282 LINC00896-202ENST00000609602 2128 ntBASIC17.27■□□□□ 0.36
ERGIC3Q9Y282 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ERGIC3Q9Y282 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ERGIC3Q9Y282 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
ERGIC3Q9Y282 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
ERGIC3Q9Y282 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
ERGIC3Q9Y282 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms