Protein–RNA interactions for Protein: Q9UN74

PCDHA4, Protocadherin alpha-4, humanhuman

Predictions only

Length 947 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA4Q9UN74 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHA4Q9UN74 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHA4Q9UN74 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHA4Q9UN74 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC21.68■■□□□ 1.06
PCDHA4Q9UN74 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC21.68■■□□□ 1.06
PCDHA4Q9UN74 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHA4Q9UN74 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHA4Q9UN74 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHA4Q9UN74 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC21.67■■□□□ 1.06
PCDHA4Q9UN74 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHA4Q9UN74 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC21.67■■□□□ 1.06
PCDHA4Q9UN74 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHA4Q9UN74 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC21.67■■□□□ 1.06
PCDHA4Q9UN74 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHA4Q9UN74 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHA4Q9UN74 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHA4Q9UN74 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC21.67■■□□□ 1.06
PCDHA4Q9UN74 C2orf69P3-201ENST00000565542 1120 ntBASIC21.67■■□□□ 1.06
PCDHA4Q9UN74 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC21.67■■□□□ 1.06
PCDHA4Q9UN74 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC21.67■■□□□ 1.06
PCDHA4Q9UN74 AC010947.1-201ENST00000623454 693 ntBASIC21.67■■□□□ 1.06
PCDHA4Q9UN74 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHA4Q9UN74 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHA4Q9UN74 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHA4Q9UN74 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC21.67■■□□□ 1.06
PCDHA4Q9UN74 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.67■■□□□ 1.06
PCDHA4Q9UN74 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.67■■□□□ 1.06
PCDHA4Q9UN74 AL512353.2-201ENST00000448759 1962 ntBASIC21.67■■□□□ 1.06
PCDHA4Q9UN74 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC21.66■■□□□ 1.06
PCDHA4Q9UN74 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
PCDHA4Q9UN74 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.66■■□□□ 1.06
PCDHA4Q9UN74 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
PCDHA4Q9UN74 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.66■■□□□ 1.06
PCDHA4Q9UN74 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHA4Q9UN74 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHA4Q9UN74 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC21.66■■□□□ 1.06
PCDHA4Q9UN74 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHA4Q9UN74 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHA4Q9UN74 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC21.66■■□□□ 1.06
PCDHA4Q9UN74 TSPY14P-201ENST00000303979 915 ntBASIC21.66■■□□□ 1.06
PCDHA4Q9UN74 HIST1H2APS4-201ENST00000362070 348 ntBASIC21.66■■□□□ 1.06
PCDHA4Q9UN74 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.66■■□□□ 1.06
PCDHA4Q9UN74 ELF3-AS1-202ENST00000419190 788 ntTSL 2 BASIC21.66■■□□□ 1.06
PCDHA4Q9UN74 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.66■■□□□ 1.06
PCDHA4Q9UN74 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHA4Q9UN74 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHA4Q9UN74 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC21.66■■□□□ 1.06
PCDHA4Q9UN74 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHA4Q9UN74 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHA4Q9UN74 AC087289.5-201ENST00000586076 3175 ntBASIC21.66■■□□□ 1.06
PCDHA4Q9UN74 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHA4Q9UN74 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC21.66■■□□□ 1.06
PCDHA4Q9UN74 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC21.66■■□□□ 1.06
PCDHA4Q9UN74 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHA4Q9UN74 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHA4Q9UN74 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHA4Q9UN74 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHA4Q9UN74 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHA4Q9UN74 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHA4Q9UN74 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHA4Q9UN74 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC21.65■■□□□ 1.06
PCDHA4Q9UN74 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC21.65■■□□□ 1.06
PCDHA4Q9UN74 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC21.65■■□□□ 1.06
PCDHA4Q9UN74 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHA4Q9UN74 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHA4Q9UN74 AC083906.6-201ENST00000641366 219 ntBASIC21.65■■□□□ 1.06
PCDHA4Q9UN74 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHA4Q9UN74 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC21.65■■□□□ 1.06
PCDHA4Q9UN74 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC21.65■■□□□ 1.06
PCDHA4Q9UN74 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC21.65■■□□□ 1.06
PCDHA4Q9UN74 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
PCDHA4Q9UN74 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHA4Q9UN74 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC21.65■■□□□ 1.06
PCDHA4Q9UN74 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC21.65■■□□□ 1.06
PCDHA4Q9UN74 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHA4Q9UN74 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21.65■■□□□ 1.06
PCDHA4Q9UN74 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC21.65■■□□□ 1.06
PCDHA4Q9UN74 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PCDHA4Q9UN74 KRT8P32-201ENST00000512863 1461 ntBASIC21.64■■□□□ 1.06
PCDHA4Q9UN74 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PCDHA4Q9UN74 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
PCDHA4Q9UN74 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PCDHA4Q9UN74 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
PCDHA4Q9UN74 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.06
PCDHA4Q9UN74 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC21.64■■□□□ 1.06
PCDHA4Q9UN74 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHA4Q9UN74 BUB3-202ENST00000368859 667 ntTSL 3 BASIC21.64■■□□□ 1.05
PCDHA4Q9UN74 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC21.64■■□□□ 1.05
PCDHA4Q9UN74 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC21.64■■□□□ 1.05
PCDHA4Q9UN74 AC087499.1-201ENST00000418141 1075 ntBASIC21.64■■□□□ 1.05
PCDHA4Q9UN74 EGLN1P1-201ENST00000531623 762 ntBASIC21.64■■□□□ 1.05
PCDHA4Q9UN74 NAPSB-206ENST00000562112 1266 ntBASIC21.64■■□□□ 1.05
PCDHA4Q9UN74 AL353719.1-201ENST00000566847 864 ntBASIC21.64■■□□□ 1.05
PCDHA4Q9UN74 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC21.64■■□□□ 1.05
PCDHA4Q9UN74 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHA4Q9UN74 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHA4Q9UN74 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHA4Q9UN74 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC21.64■■□□□ 1.05
PCDHA4Q9UN74 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
PCDHA4Q9UN74 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms